Protein–RNA interactions for Protein: A0A075B6C2

Trav13-4-dv7, T cell receptor alpha variable 13-4-DV7 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-4-dv7A0A075B6C2 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trav13-4-dv7A0A075B6C2 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trav13-4-dv7A0A075B6C2 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trav13-4-dv7A0A075B6C2 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Trav13-4-dv7A0A075B6C2 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trav13-4-dv7A0A075B6C2 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC9.58□□□□□ -0.88
Trav13-4-dv7A0A075B6C2 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trav13-4-dv7A0A075B6C2 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trav13-4-dv7A0A075B6C2 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trav13-4-dv7A0A075B6C2 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trav13-4-dv7A0A075B6C2 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trav13-4-dv7A0A075B6C2 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trav13-4-dv7A0A075B6C2 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC9.58□□□□□ -0.88
Trav13-4-dv7A0A075B6C2 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trav13-4-dv7A0A075B6C2 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC9.58□□□□□ -0.88
Trav13-4-dv7A0A075B6C2 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Trav13-4-dv7A0A075B6C2 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC9.58□□□□□ -0.88
Trav13-4-dv7A0A075B6C2 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trav13-4-dv7A0A075B6C2 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Trav13-4-dv7A0A075B6C2 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC9.58□□□□□ -0.88
Trav13-4-dv7A0A075B6C2 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trav13-4-dv7A0A075B6C2 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC9.58□□□□□ -0.88
Trav13-4-dv7A0A075B6C2 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trav13-4-dv7A0A075B6C2 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC9.58□□□□□ -0.88
Trav13-4-dv7A0A075B6C2 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trav13-4-dv7A0A075B6C2 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trav13-4-dv7A0A075B6C2 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trav13-4-dv7A0A075B6C2 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trav13-4-dv7A0A075B6C2 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trav13-4-dv7A0A075B6C2 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Trav13-4-dv7A0A075B6C2 Gm12020-201ENSMUST00000119030 2042 ntBASIC9.58□□□□□ -0.88
Trav13-4-dv7A0A075B6C2 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trav13-4-dv7A0A075B6C2 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC9.58□□□□□ -0.88
Trav13-4-dv7A0A075B6C2 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC9.58□□□□□ -0.88
Trav13-4-dv7A0A075B6C2 AC154527.4-201ENSMUST00000224364 1667 ntBASIC9.58□□□□□ -0.88
Trav13-4-dv7A0A075B6C2 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trav13-4-dv7A0A075B6C2 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trav13-4-dv7A0A075B6C2 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trav13-4-dv7A0A075B6C2 AC122901.1-201ENSMUST00000214203 1790 ntBASIC9.58□□□□□ -0.88
Trav13-4-dv7A0A075B6C2 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trav13-4-dv7A0A075B6C2 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trav13-4-dv7A0A075B6C2 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trav13-4-dv7A0A075B6C2 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC9.57□□□□□ -0.88
Trav13-4-dv7A0A075B6C2 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Trav13-4-dv7A0A075B6C2 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trav13-4-dv7A0A075B6C2 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC9.57□□□□□ -0.88
Trav13-4-dv7A0A075B6C2 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trav13-4-dv7A0A075B6C2 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trav13-4-dv7A0A075B6C2 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Trav13-4-dv7A0A075B6C2 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trav13-4-dv7A0A075B6C2 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trav13-4-dv7A0A075B6C2 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trav13-4-dv7A0A075B6C2 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trav13-4-dv7A0A075B6C2 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trav13-4-dv7A0A075B6C2 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trav13-4-dv7A0A075B6C2 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trav13-4-dv7A0A075B6C2 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trav13-4-dv7A0A075B6C2 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC9.57□□□□□ -0.88
Trav13-4-dv7A0A075B6C2 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trav13-4-dv7A0A075B6C2 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trav13-4-dv7A0A075B6C2 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trav13-4-dv7A0A075B6C2 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC9.57□□□□□ -0.88
Trav13-4-dv7A0A075B6C2 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC9.57□□□□□ -0.88
Trav13-4-dv7A0A075B6C2 Gm10275-202ENSMUST00000168697 495 ntBASIC9.57□□□□□ -0.88
Trav13-4-dv7A0A075B6C2 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC9.57□□□□□ -0.88
Trav13-4-dv7A0A075B6C2 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Trav13-4-dv7A0A075B6C2 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trav13-4-dv7A0A075B6C2 Gm10275-201ENSMUST00000092620 635 ntBASIC9.57□□□□□ -0.88
Trav13-4-dv7A0A075B6C2 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC9.57□□□□□ -0.88
Trav13-4-dv7A0A075B6C2 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trav13-4-dv7A0A075B6C2 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC9.57□□□□□ -0.88
Trav13-4-dv7A0A075B6C2 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trav13-4-dv7A0A075B6C2 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trav13-4-dv7A0A075B6C2 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC9.57□□□□□ -0.88
Trav13-4-dv7A0A075B6C2 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trav13-4-dv7A0A075B6C2 Gm11405-201ENSMUST00000118689 1556 ntBASIC9.57□□□□□ -0.88
Trav13-4-dv7A0A075B6C2 Gm18244-201ENSMUST00000219747 1566 ntBASIC9.57□□□□□ -0.88
Trav13-4-dv7A0A075B6C2 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC9.57□□□□□ -0.88
Trav13-4-dv7A0A075B6C2 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trav13-4-dv7A0A075B6C2 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trav13-4-dv7A0A075B6C2 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trav13-4-dv7A0A075B6C2 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trav13-4-dv7A0A075B6C2 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Trav13-4-dv7A0A075B6C2 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC9.56□□□□□ -0.88
Trav13-4-dv7A0A075B6C2 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Trav13-4-dv7A0A075B6C2 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Trav13-4-dv7A0A075B6C2 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Trav13-4-dv7A0A075B6C2 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Trav13-4-dv7A0A075B6C2 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Trav13-4-dv7A0A075B6C2 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Trav13-4-dv7A0A075B6C2 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Trav13-4-dv7A0A075B6C2 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Trav13-4-dv7A0A075B6C2 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC9.56□□□□□ -0.88
Trav13-4-dv7A0A075B6C2 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC9.56□□□□□ -0.88
Trav13-4-dv7A0A075B6C2 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Trav13-4-dv7A0A075B6C2 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Trav13-4-dv7A0A075B6C2 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC9.56□□□□□ -0.88
Trav13-4-dv7A0A075B6C2 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Trav13-4-dv7A0A075B6C2 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC9.56□□□□□ -0.88
Trav13-4-dv7A0A075B6C2 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC9.56□□□□□ -0.88
Retrieved 100 of 76,532 protein–RNA pairs in 50.8 ms