Protein–RNA interactions for Protein: A0A075B6B2

Trav6n-6, T cell receptor alpha variable 6N-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-6A0A075B6B2 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav6n-6A0A075B6B2 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Trav6n-6A0A075B6B2 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC10.39□□□□□ -0.75
Trav6n-6A0A075B6B2 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav6n-6A0A075B6B2 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Trav6n-6A0A075B6B2 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC10.39□□□□□ -0.75
Trav6n-6A0A075B6B2 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav6n-6A0A075B6B2 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav6n-6A0A075B6B2 Gm18263-201ENSMUST00000220846 1928 ntBASIC10.39□□□□□ -0.75
Trav6n-6A0A075B6B2 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav6n-6A0A075B6B2 Gm7049-201ENSMUST00000223520 1712 ntBASIC10.38□□□□□ -0.75
Trav6n-6A0A075B6B2 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav6n-6A0A075B6B2 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav6n-6A0A075B6B2 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav6n-6A0A075B6B2 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Trav6n-6A0A075B6B2 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC10.38□□□□□ -0.75
Trav6n-6A0A075B6B2 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav6n-6A0A075B6B2 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Trav6n-6A0A075B6B2 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav6n-6A0A075B6B2 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Trav6n-6A0A075B6B2 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav6n-6A0A075B6B2 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav6n-6A0A075B6B2 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav6n-6A0A075B6B2 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav6n-6A0A075B6B2 Gm11779-201ENSMUST00000118541 368 ntBASIC10.38□□□□□ -0.75
Trav6n-6A0A075B6B2 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Trav6n-6A0A075B6B2 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC10.38□□□□□ -0.75
Trav6n-6A0A075B6B2 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC10.38□□□□□ -0.75
Trav6n-6A0A075B6B2 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC10.38□□□□□ -0.75
Trav6n-6A0A075B6B2 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC10.38□□□□□ -0.75
Trav6n-6A0A075B6B2 Gm5712-201ENSMUST00000199748 1043 ntBASIC10.38□□□□□ -0.75
Trav6n-6A0A075B6B2 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC10.38□□□□□ -0.75
Trav6n-6A0A075B6B2 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav6n-6A0A075B6B2 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Trav6n-6A0A075B6B2 Ndufaf2-202ENSMUST00000223734 556 ntBASIC10.38□□□□□ -0.75
Trav6n-6A0A075B6B2 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav6n-6A0A075B6B2 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav6n-6A0A075B6B2 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav6n-6A0A075B6B2 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC10.38□□□□□ -0.75
Trav6n-6A0A075B6B2 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC10.38□□□□□ -0.75
Trav6n-6A0A075B6B2 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav6n-6A0A075B6B2 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Trav6n-6A0A075B6B2 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC10.38□□□□□ -0.75
Trav6n-6A0A075B6B2 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav6n-6A0A075B6B2 Gm8096-201ENSMUST00000209921 1591 ntBASIC10.38□□□□□ -0.75
Trav6n-6A0A075B6B2 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC10.38□□□□□ -0.75
Trav6n-6A0A075B6B2 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav6n-6A0A075B6B2 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav6n-6A0A075B6B2 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav6n-6A0A075B6B2 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav6n-6A0A075B6B2 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav6n-6A0A075B6B2 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav6n-6A0A075B6B2 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Trav6n-6A0A075B6B2 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav6n-6A0A075B6B2 AC125108.1-201ENSMUST00000218986 2330 ntBASIC10.38□□□□□ -0.75
Trav6n-6A0A075B6B2 AC130669.1-201ENSMUST00000228537 1672 ntBASIC10.38□□□□□ -0.75
Trav6n-6A0A075B6B2 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Trav6n-6A0A075B6B2 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC10.37□□□□□ -0.75
Trav6n-6A0A075B6B2 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Trav6n-6A0A075B6B2 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
Trav6n-6A0A075B6B2 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav6n-6A0A075B6B2 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Trav6n-6A0A075B6B2 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav6n-6A0A075B6B2 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Trav6n-6A0A075B6B2 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
Trav6n-6A0A075B6B2 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav6n-6A0A075B6B2 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Trav6n-6A0A075B6B2 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC10.37□□□□□ -0.75
Trav6n-6A0A075B6B2 Gm15593-201ENSMUST00000122085 1008 ntBASIC10.37□□□□□ -0.75
Trav6n-6A0A075B6B2 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Trav6n-6A0A075B6B2 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC10.37□□□□□ -0.75
Trav6n-6A0A075B6B2 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav6n-6A0A075B6B2 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Trav6n-6A0A075B6B2 Gm7229-201ENSMUST00000214719 1007 ntBASIC10.37□□□□□ -0.75
Trav6n-6A0A075B6B2 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC10.37□□□□□ -0.75
Trav6n-6A0A075B6B2 AC159295.1-201ENSMUST00000225326 940 ntBASIC10.37□□□□□ -0.75
Trav6n-6A0A075B6B2 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav6n-6A0A075B6B2 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC10.37□□□□□ -0.75
Trav6n-6A0A075B6B2 Gm10154-201ENSMUST00000084445 354 ntBASIC10.37□□□□□ -0.75
Trav6n-6A0A075B6B2 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Trav6n-6A0A075B6B2 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
Trav6n-6A0A075B6B2 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Trav6n-6A0A075B6B2 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav6n-6A0A075B6B2 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC10.37□□□□□ -0.75
Trav6n-6A0A075B6B2 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC10.37□□□□□ -0.75
Trav6n-6A0A075B6B2 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Trav6n-6A0A075B6B2 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav6n-6A0A075B6B2 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav6n-6A0A075B6B2 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC10.37□□□□□ -0.75
Trav6n-6A0A075B6B2 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav6n-6A0A075B6B2 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav6n-6A0A075B6B2 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav6n-6A0A075B6B2 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav6n-6A0A075B6B2 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav6n-6A0A075B6B2 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav6n-6A0A075B6B2 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC10.37□□□□□ -0.75
Trav6n-6A0A075B6B2 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav6n-6A0A075B6B2 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav6n-6A0A075B6B2 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Trav6n-6A0A075B6B2 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms