Protein–RNA interactions for Protein: A0A075B620

Trav7n-4, T cell receptor alpha variable 7N-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7n-4A0A075B620 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Trav7n-4A0A075B620 Gm10275-201ENSMUST00000092620 635 ntBASIC10.5□□□□□ -0.73
Trav7n-4A0A075B620 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC10.5□□□□□ -0.73
Trav7n-4A0A075B620 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav7n-4A0A075B620 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav7n-4A0A075B620 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC10.5□□□□□ -0.73
Trav7n-4A0A075B620 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav7n-4A0A075B620 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav7n-4A0A075B620 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav7n-4A0A075B620 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Trav7n-4A0A075B620 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav7n-4A0A075B620 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav7n-4A0A075B620 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC10.5□□□□□ -0.73
Trav7n-4A0A075B620 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav7n-4A0A075B620 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav7n-4A0A075B620 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
Trav7n-4A0A075B620 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
Trav7n-4A0A075B620 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav7n-4A0A075B620 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC10.5□□□□□ -0.73
Trav7n-4A0A075B620 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav7n-4A0A075B620 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
Trav7n-4A0A075B620 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Trav7n-4A0A075B620 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC10.5□□□□□ -0.73
Trav7n-4A0A075B620 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC10.5□□□□□ -0.73
Trav7n-4A0A075B620 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC10.49□□□□□ -0.73
Trav7n-4A0A075B620 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav7n-4A0A075B620 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav7n-4A0A075B620 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav7n-4A0A075B620 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav7n-4A0A075B620 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC10.49□□□□□ -0.73
Trav7n-4A0A075B620 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC10.49□□□□□ -0.73
Trav7n-4A0A075B620 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav7n-4A0A075B620 Gm10327-201ENSMUST00000105222 1002 ntBASIC10.49□□□□□ -0.73
Trav7n-4A0A075B620 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Trav7n-4A0A075B620 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav7n-4A0A075B620 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC10.49□□□□□ -0.73
Trav7n-4A0A075B620 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Trav7n-4A0A075B620 Gm5682-201ENSMUST00000173402 505 ntBASIC10.49□□□□□ -0.73
Trav7n-4A0A075B620 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav7n-4A0A075B620 Gm10231-201ENSMUST00000181584 441 ntBASIC10.49□□□□□ -0.73
Trav7n-4A0A075B620 Gm4535-201ENSMUST00000182274 558 ntBASIC10.49□□□□□ -0.73
Trav7n-4A0A075B620 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav7n-4A0A075B620 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav7n-4A0A075B620 Gm5069-202ENSMUST00000192714 1011 ntBASIC10.49□□□□□ -0.73
Trav7n-4A0A075B620 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC10.49□□□□□ -0.73
Trav7n-4A0A075B620 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav7n-4A0A075B620 Gm10175-202ENSMUST00000208752 441 ntBASIC10.49□□□□□ -0.73
Trav7n-4A0A075B620 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Trav7n-4A0A075B620 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC10.49□□□□□ -0.73
Trav7n-4A0A075B620 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC10.49□□□□□ -0.73
Trav7n-4A0A075B620 AC124569.2-201ENSMUST00000225998 818 ntBASIC10.49□□□□□ -0.73
Trav7n-4A0A075B620 AC147366.1-201ENSMUST00000227671 852 ntBASIC10.49□□□□□ -0.73
Trav7n-4A0A075B620 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav7n-4A0A075B620 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav7n-4A0A075B620 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC10.49□□□□□ -0.73
Trav7n-4A0A075B620 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav7n-4A0A075B620 Gm10355-201ENSMUST00000097146 517 ntBASIC10.49□□□□□ -0.73
Trav7n-4A0A075B620 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC10.49□□□□□ -0.73
Trav7n-4A0A075B620 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Trav7n-4A0A075B620 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav7n-4A0A075B620 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC10.49□□□□□ -0.73
Trav7n-4A0A075B620 AC119177.1-201ENSMUST00000227647 1332 ntBASIC10.49□□□□□ -0.73
Trav7n-4A0A075B620 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
Trav7n-4A0A075B620 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav7n-4A0A075B620 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav7n-4A0A075B620 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
Trav7n-4A0A075B620 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav7n-4A0A075B620 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav7n-4A0A075B620 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav7n-4A0A075B620 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav7n-4A0A075B620 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav7n-4A0A075B620 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav7n-4A0A075B620 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Trav7n-4A0A075B620 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav7n-4A0A075B620 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav7n-4A0A075B620 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav7n-4A0A075B620 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav7n-4A0A075B620 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav7n-4A0A075B620 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Trav7n-4A0A075B620 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav7n-4A0A075B620 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav7n-4A0A075B620 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Trav7n-4A0A075B620 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav7n-4A0A075B620 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
Trav7n-4A0A075B620 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav7n-4A0A075B620 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav7n-4A0A075B620 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
Trav7n-4A0A075B620 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC10.48□□□□□ -0.73
Trav7n-4A0A075B620 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
Trav7n-4A0A075B620 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav7n-4A0A075B620 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Trav7n-4A0A075B620 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Trav7n-4A0A075B620 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Trav7n-4A0A075B620 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav7n-4A0A075B620 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav7n-4A0A075B620 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav7n-4A0A075B620 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
Trav7n-4A0A075B620 Gm45743-201ENSMUST00000212701 2795 ntBASIC10.48□□□□□ -0.73
Trav7n-4A0A075B620 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC10.48□□□□□ -0.73
Trav7n-4A0A075B620 Gm12644-201ENSMUST00000119935 606 ntBASIC10.48□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms