Protein–RNA interactions for Protein: S4R2K0

Pdf, Peptide deformylase, mousemouse

Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdfS4R2K0 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
PdfS4R2K0 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
PdfS4R2K0 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
PdfS4R2K0 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
PdfS4R2K0 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
PdfS4R2K0 Trav13-3-201ENSMUST00000117226 336 ntBASIC10.68□□□□□ -0.7
PdfS4R2K0 Gm11185-201ENSMUST00000117732 1007 ntBASIC10.68□□□□□ -0.7
PdfS4R2K0 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC10.68□□□□□ -0.7
PdfS4R2K0 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
PdfS4R2K0 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
PdfS4R2K0 Gm37935-201ENSMUST00000192012 982 ntBASIC10.68□□□□□ -0.7
PdfS4R2K0 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
PdfS4R2K0 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
PdfS4R2K0 AC151836.1-202ENSMUST00000226259 753 ntBASIC10.68□□□□□ -0.7
PdfS4R2K0 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
PdfS4R2K0 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
PdfS4R2K0 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
PdfS4R2K0 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
PdfS4R2K0 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
PdfS4R2K0 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
PdfS4R2K0 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC10.68□□□□□ -0.7
PdfS4R2K0 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
PdfS4R2K0 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
PdfS4R2K0 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
PdfS4R2K0 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
PdfS4R2K0 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
PdfS4R2K0 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
PdfS4R2K0 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
PdfS4R2K0 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC10.68□□□□□ -0.7
PdfS4R2K0 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
PdfS4R2K0 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
PdfS4R2K0 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
PdfS4R2K0 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
PdfS4R2K0 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
PdfS4R2K0 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
PdfS4R2K0 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
PdfS4R2K0 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
PdfS4R2K0 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
PdfS4R2K0 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
PdfS4R2K0 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC10.67□□□□□ -0.7
PdfS4R2K0 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
PdfS4R2K0 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
PdfS4R2K0 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC10.67□□□□□ -0.7
PdfS4R2K0 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
PdfS4R2K0 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
PdfS4R2K0 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
PdfS4R2K0 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
PdfS4R2K0 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
PdfS4R2K0 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
PdfS4R2K0 Gm9726-201ENSMUST00000180321 678 ntBASIC10.67□□□□□ -0.7
PdfS4R2K0 Gm2756-201ENSMUST00000195851 400 ntBASIC10.67□□□□□ -0.7
PdfS4R2K0 AC131709.1-201ENSMUST00000224731 1180 ntBASIC10.67□□□□□ -0.7
PdfS4R2K0 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
PdfS4R2K0 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
PdfS4R2K0 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
PdfS4R2K0 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
PdfS4R2K0 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
PdfS4R2K0 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
PdfS4R2K0 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
PdfS4R2K0 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
PdfS4R2K0 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
PdfS4R2K0 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
PdfS4R2K0 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
PdfS4R2K0 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC10.67□□□□□ -0.7
PdfS4R2K0 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
PdfS4R2K0 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
PdfS4R2K0 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
PdfS4R2K0 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
PdfS4R2K0 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
PdfS4R2K0 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
PdfS4R2K0 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
PdfS4R2K0 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
PdfS4R2K0 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
PdfS4R2K0 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC10.66□□□□□ -0.7
PdfS4R2K0 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
PdfS4R2K0 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
PdfS4R2K0 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
PdfS4R2K0 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC10.66□□□□□ -0.7
PdfS4R2K0 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
PdfS4R2K0 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
PdfS4R2K0 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
PdfS4R2K0 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
PdfS4R2K0 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC10.66□□□□□ -0.7
PdfS4R2K0 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
PdfS4R2K0 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
PdfS4R2K0 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
PdfS4R2K0 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
PdfS4R2K0 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
PdfS4R2K0 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
PdfS4R2K0 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
PdfS4R2K0 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC10.66□□□□□ -0.7
PdfS4R2K0 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
PdfS4R2K0 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
PdfS4R2K0 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
PdfS4R2K0 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC10.66□□□□□ -0.7
PdfS4R2K0 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
PdfS4R2K0 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC10.66□□□□□ -0.7
PdfS4R2K0 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
PdfS4R2K0 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
PdfS4R2K0 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms