Protein–RNA interactions for Protein: Q9Z2V5

Hdac6, Histone deacetylase 6, mousemouse

Predictions only

Length 1,149 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac6Q9Z2V5 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
Hdac6Q9Z2V5 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC17.31■□□□□ 0.36
Hdac6Q9Z2V5 Gm18935-201ENSMUST00000212692 664 ntBASIC17.31■□□□□ 0.36
Hdac6Q9Z2V5 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC17.31■□□□□ 0.36
Hdac6Q9Z2V5 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Hdac6Q9Z2V5 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Hdac6Q9Z2V5 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Hdac6Q9Z2V5 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Hdac6Q9Z2V5 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Hdac6Q9Z2V5 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Hdac6Q9Z2V5 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC17.31■□□□□ 0.36
Hdac6Q9Z2V5 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC17.31■□□□□ 0.36
Hdac6Q9Z2V5 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Hdac6Q9Z2V5 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Hdac6Q9Z2V5 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Hdac6Q9Z2V5 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Hdac6Q9Z2V5 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hdac6Q9Z2V5 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hdac6Q9Z2V5 Gm20632-201ENSMUST00000176760 2427 ntBASIC17.3■□□□□ 0.36
Hdac6Q9Z2V5 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hdac6Q9Z2V5 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hdac6Q9Z2V5 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC17.3■□□□□ 0.36
Hdac6Q9Z2V5 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Hdac6Q9Z2V5 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC17.3■□□□□ 0.36
Hdac6Q9Z2V5 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hdac6Q9Z2V5 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hdac6Q9Z2V5 Gm8337-201ENSMUST00000187358 1938 ntBASIC17.3■□□□□ 0.36
Hdac6Q9Z2V5 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Hdac6Q9Z2V5 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC17.3■□□□□ 0.36
Hdac6Q9Z2V5 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Hdac6Q9Z2V5 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC17.3■□□□□ 0.36
Hdac6Q9Z2V5 Gm25927-201ENSMUST00000175058 117 ntBASIC17.3■□□□□ 0.36
Hdac6Q9Z2V5 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Hdac6Q9Z2V5 Gm44364-201ENSMUST00000198368 141 ntBASIC17.3■□□□□ 0.36
Hdac6Q9Z2V5 Olfr284-202ENSMUST00000206647 966 ntBASIC17.3■□□□□ 0.36
Hdac6Q9Z2V5 AC159747.1-201ENSMUST00000219903 265 ntBASIC17.3■□□□□ 0.36
Hdac6Q9Z2V5 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC17.3■□□□□ 0.36
Hdac6Q9Z2V5 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hdac6Q9Z2V5 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hdac6Q9Z2V5 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hdac6Q9Z2V5 Gm15544-201ENSMUST00000118776 1531 ntBASIC17.3■□□□□ 0.36
Hdac6Q9Z2V5 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hdac6Q9Z2V5 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hdac6Q9Z2V5 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Hdac6Q9Z2V5 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Hdac6Q9Z2V5 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hdac6Q9Z2V5 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hdac6Q9Z2V5 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC17.29■□□□□ 0.36
Hdac6Q9Z2V5 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hdac6Q9Z2V5 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hdac6Q9Z2V5 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hdac6Q9Z2V5 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hdac6Q9Z2V5 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC17.29■□□□□ 0.36
Hdac6Q9Z2V5 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hdac6Q9Z2V5 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
Hdac6Q9Z2V5 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hdac6Q9Z2V5 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC17.29■□□□□ 0.36
Hdac6Q9Z2V5 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hdac6Q9Z2V5 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Hdac6Q9Z2V5 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC17.29■□□□□ 0.36
Hdac6Q9Z2V5 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC17.29■□□□□ 0.36
Hdac6Q9Z2V5 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hdac6Q9Z2V5 Gm8584-201ENSMUST00000171982 758 ntBASIC17.29■□□□□ 0.36
Hdac6Q9Z2V5 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Hdac6Q9Z2V5 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Hdac6Q9Z2V5 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC17.29■□□□□ 0.36
Hdac6Q9Z2V5 Cts7-204ENSMUST00000225321 1257 ntBASIC17.29■□□□□ 0.36
Hdac6Q9Z2V5 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hdac6Q9Z2V5 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Hdac6Q9Z2V5 Gm10146-201ENSMUST00000072739 309 ntBASIC17.29■□□□□ 0.36
Hdac6Q9Z2V5 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hdac6Q9Z2V5 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Hdac6Q9Z2V5 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hdac6Q9Z2V5 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hdac6Q9Z2V5 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Hdac6Q9Z2V5 Gm10040-201ENSMUST00000080726 1662 ntBASIC17.29■□□□□ 0.36
Hdac6Q9Z2V5 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Hdac6Q9Z2V5 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hdac6Q9Z2V5 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hdac6Q9Z2V5 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hdac6Q9Z2V5 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
Hdac6Q9Z2V5 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hdac6Q9Z2V5 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC17.28■□□□□ 0.36
Hdac6Q9Z2V5 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hdac6Q9Z2V5 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hdac6Q9Z2V5 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hdac6Q9Z2V5 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hdac6Q9Z2V5 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hdac6Q9Z2V5 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hdac6Q9Z2V5 Gm38102-201ENSMUST00000192791 1935 ntBASIC17.28■□□□□ 0.36
Hdac6Q9Z2V5 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hdac6Q9Z2V5 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
Hdac6Q9Z2V5 Gm13886-201ENSMUST00000117876 1183 ntBASIC17.28■□□□□ 0.36
Hdac6Q9Z2V5 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC17.28■□□□□ 0.36
Hdac6Q9Z2V5 Gm38341-201ENSMUST00000195357 515 ntBASIC17.28■□□□□ 0.36
Hdac6Q9Z2V5 Gm9368-201ENSMUST00000219348 831 ntBASIC17.28■□□□□ 0.36
Hdac6Q9Z2V5 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hdac6Q9Z2V5 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hdac6Q9Z2V5 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC17.28■□□□□ 0.36
Hdac6Q9Z2V5 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms