Protein–RNA interactions for Protein: Q9Z0D9

Cx3cr1, CX3C chemokine receptor 1, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cr1Q9Z0D9 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cx3cr1Q9Z0D9 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Cx3cr1Q9Z0D9 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cx3cr1Q9Z0D9 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC11.78□□□□□ -0.52
Cx3cr1Q9Z0D9 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC11.78□□□□□ -0.52
Cx3cr1Q9Z0D9 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Cx3cr1Q9Z0D9 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC11.78□□□□□ -0.52
Cx3cr1Q9Z0D9 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cx3cr1Q9Z0D9 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC11.78□□□□□ -0.52
Cx3cr1Q9Z0D9 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cx3cr1Q9Z0D9 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cx3cr1Q9Z0D9 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cx3cr1Q9Z0D9 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cx3cr1Q9Z0D9 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Cx3cr1Q9Z0D9 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Cx3cr1Q9Z0D9 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.52
Cx3cr1Q9Z0D9 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Cx3cr1Q9Z0D9 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.52
Cx3cr1Q9Z0D9 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.52
Cx3cr1Q9Z0D9 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Cx3cr1Q9Z0D9 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cx3cr1Q9Z0D9 Gm37795-201ENSMUST00000194216 2459 ntBASIC11.77□□□□□ -0.53
Cx3cr1Q9Z0D9 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cx3cr1Q9Z0D9 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cx3cr1Q9Z0D9 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Cx3cr1Q9Z0D9 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cx3cr1Q9Z0D9 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Cx3cr1Q9Z0D9 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC11.77□□□□□ -0.53
Cx3cr1Q9Z0D9 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC11.77□□□□□ -0.53
Cx3cr1Q9Z0D9 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC11.77□□□□□ -0.53
Cx3cr1Q9Z0D9 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC11.77□□□□□ -0.53
Cx3cr1Q9Z0D9 Gm15483-201ENSMUST00000120338 456 ntBASIC11.77□□□□□ -0.53
Cx3cr1Q9Z0D9 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Cx3cr1Q9Z0D9 Gm5177-201ENSMUST00000183092 997 ntBASIC11.77□□□□□ -0.53
Cx3cr1Q9Z0D9 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC11.77□□□□□ -0.53
Cx3cr1Q9Z0D9 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC11.77□□□□□ -0.53
Cx3cr1Q9Z0D9 AC161829.1-201ENSMUST00000220298 281 ntBASIC11.77□□□□□ -0.53
Cx3cr1Q9Z0D9 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Cx3cr1Q9Z0D9 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cx3cr1Q9Z0D9 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Cx3cr1Q9Z0D9 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Cx3cr1Q9Z0D9 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Cx3cr1Q9Z0D9 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Cx3cr1Q9Z0D9 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cx3cr1Q9Z0D9 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Cx3cr1Q9Z0D9 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cx3cr1Q9Z0D9 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC11.77□□□□□ -0.53
Cx3cr1Q9Z0D9 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Cx3cr1Q9Z0D9 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cx3cr1Q9Z0D9 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Cx3cr1Q9Z0D9 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Cx3cr1Q9Z0D9 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC11.77□□□□□ -0.53
Cx3cr1Q9Z0D9 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Cx3cr1Q9Z0D9 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Cx3cr1Q9Z0D9 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Cx3cr1Q9Z0D9 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cx3cr1Q9Z0D9 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cx3cr1Q9Z0D9 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
Cx3cr1Q9Z0D9 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cx3cr1Q9Z0D9 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Cx3cr1Q9Z0D9 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cx3cr1Q9Z0D9 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cx3cr1Q9Z0D9 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cx3cr1Q9Z0D9 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cx3cr1Q9Z0D9 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cx3cr1Q9Z0D9 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Cx3cr1Q9Z0D9 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC11.76□□□□□ -0.53
Cx3cr1Q9Z0D9 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Cx3cr1Q9Z0D9 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cx3cr1Q9Z0D9 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC11.76□□□□□ -0.53
Cx3cr1Q9Z0D9 Gm24589-201ENSMUST00000116692 94 ntBASIC11.76□□□□□ -0.53
Cx3cr1Q9Z0D9 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC11.76□□□□□ -0.53
Cx3cr1Q9Z0D9 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cx3cr1Q9Z0D9 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC11.76□□□□□ -0.53
Cx3cr1Q9Z0D9 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cx3cr1Q9Z0D9 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Cx3cr1Q9Z0D9 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cx3cr1Q9Z0D9 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cx3cr1Q9Z0D9 Gm15590-201ENSMUST00000078419 552 ntBASIC11.76□□□□□ -0.53
Cx3cr1Q9Z0D9 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cx3cr1Q9Z0D9 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cx3cr1Q9Z0D9 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC11.76□□□□□ -0.53
Cx3cr1Q9Z0D9 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cx3cr1Q9Z0D9 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cx3cr1Q9Z0D9 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cx3cr1Q9Z0D9 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cx3cr1Q9Z0D9 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cx3cr1Q9Z0D9 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Cx3cr1Q9Z0D9 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cx3cr1Q9Z0D9 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cx3cr1Q9Z0D9 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC11.76□□□□□ -0.53
Cx3cr1Q9Z0D9 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cx3cr1Q9Z0D9 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Cx3cr1Q9Z0D9 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cx3cr1Q9Z0D9 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cx3cr1Q9Z0D9 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cx3cr1Q9Z0D9 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cx3cr1Q9Z0D9 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cx3cr1Q9Z0D9 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cx3cr1Q9Z0D9 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 98.9 ms