Protein–RNA interactions for Protein: Q9R0X5

Rpgr, X-linked retinitis pigmentosa GTPase regulator, mousemouse

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RpgrQ9R0X5 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RpgrQ9R0X5 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
RpgrQ9R0X5 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
RpgrQ9R0X5 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC14.17□□□□□ -0.14
RpgrQ9R0X5 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
RpgrQ9R0X5 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RpgrQ9R0X5 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
RpgrQ9R0X5 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC14.17□□□□□ -0.14
RpgrQ9R0X5 Gm10253-201ENSMUST00000194270 940 ntBASIC14.17□□□□□ -0.14
RpgrQ9R0X5 Gm5312-201ENSMUST00000203728 547 ntBASIC14.17□□□□□ -0.14
RpgrQ9R0X5 AC155729.1-201ENSMUST00000227758 544 ntBASIC14.17□□□□□ -0.14
RpgrQ9R0X5 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RpgrQ9R0X5 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RpgrQ9R0X5 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
RpgrQ9R0X5 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC14.17□□□□□ -0.14
RpgrQ9R0X5 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC14.17□□□□□ -0.14
RpgrQ9R0X5 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
RpgrQ9R0X5 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RpgrQ9R0X5 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RpgrQ9R0X5 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RpgrQ9R0X5 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RpgrQ9R0X5 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RpgrQ9R0X5 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
RpgrQ9R0X5 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RpgrQ9R0X5 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
RpgrQ9R0X5 Gm42466-201ENSMUST00000202099 1301 ntBASIC14.16□□□□□ -0.14
RpgrQ9R0X5 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
RpgrQ9R0X5 Gm42872-201ENSMUST00000200026 1967 ntBASIC14.16□□□□□ -0.14
RpgrQ9R0X5 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RpgrQ9R0X5 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RpgrQ9R0X5 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RpgrQ9R0X5 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RpgrQ9R0X5 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RpgrQ9R0X5 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RpgrQ9R0X5 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC14.16□□□□□ -0.14
RpgrQ9R0X5 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RpgrQ9R0X5 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC14.16□□□□□ -0.14
RpgrQ9R0X5 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
RpgrQ9R0X5 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC14.16□□□□□ -0.14
RpgrQ9R0X5 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
RpgrQ9R0X5 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
RpgrQ9R0X5 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
RpgrQ9R0X5 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC14.16□□□□□ -0.14
RpgrQ9R0X5 AC140397.2-201ENSMUST00000224213 834 ntBASIC14.16□□□□□ -0.14
RpgrQ9R0X5 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
RpgrQ9R0X5 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC14.16□□□□□ -0.14
RpgrQ9R0X5 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
RpgrQ9R0X5 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RpgrQ9R0X5 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RpgrQ9R0X5 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
RpgrQ9R0X5 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
RpgrQ9R0X5 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
RpgrQ9R0X5 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC14.16□□□□□ -0.14
RpgrQ9R0X5 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RpgrQ9R0X5 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
RpgrQ9R0X5 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RpgrQ9R0X5 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
RpgrQ9R0X5 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RpgrQ9R0X5 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RpgrQ9R0X5 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
RpgrQ9R0X5 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC14.16□□□□□ -0.14
RpgrQ9R0X5 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RpgrQ9R0X5 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RpgrQ9R0X5 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RpgrQ9R0X5 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RpgrQ9R0X5 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC14.15□□□□□ -0.14
RpgrQ9R0X5 Gm6756-201ENSMUST00000180647 1620 ntBASIC14.15□□□□□ -0.14
RpgrQ9R0X5 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
RpgrQ9R0X5 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC14.15□□□□□ -0.14
RpgrQ9R0X5 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
RpgrQ9R0X5 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RpgrQ9R0X5 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
RpgrQ9R0X5 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
RpgrQ9R0X5 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RpgrQ9R0X5 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RpgrQ9R0X5 Carlr-201ENSMUST00000181515 2574 ntBASIC14.15□□□□□ -0.14
RpgrQ9R0X5 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RpgrQ9R0X5 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
RpgrQ9R0X5 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
RpgrQ9R0X5 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC14.15□□□□□ -0.14
RpgrQ9R0X5 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RpgrQ9R0X5 Tcf21-202ENSMUST00000218002 1788 ntBASIC14.15□□□□□ -0.14
RpgrQ9R0X5 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
RpgrQ9R0X5 Gm23935-201ENSMUST00000102303 57 ntBASIC14.15□□□□□ -0.14
RpgrQ9R0X5 Gm24270-201ENSMUST00000102326 57 ntBASIC14.15□□□□□ -0.14
RpgrQ9R0X5 Gm22065-201ENSMUST00000103753 110 ntBASIC14.15□□□□□ -0.14
RpgrQ9R0X5 Gm22066-201ENSMUST00000103761 110 ntBASIC14.15□□□□□ -0.14
RpgrQ9R0X5 Gm24932-201ENSMUST00000103763 110 ntBASIC14.15□□□□□ -0.14
RpgrQ9R0X5 Gm24115-201ENSMUST00000103799 110 ntBASIC14.15□□□□□ -0.14
RpgrQ9R0X5 Gm22190-201ENSMUST00000103827 110 ntBASIC14.15□□□□□ -0.14
RpgrQ9R0X5 Gm22191-201ENSMUST00000103831 110 ntBASIC14.15□□□□□ -0.14
RpgrQ9R0X5 Gm24721-201ENSMUST00000103849 110 ntBASIC14.15□□□□□ -0.14
RpgrQ9R0X5 Gm28018-201ENSMUST00000103869 110 ntBASIC14.15□□□□□ -0.14
RpgrQ9R0X5 Gm26399-201ENSMUST00000103937 110 ntBASIC14.15□□□□□ -0.14
RpgrQ9R0X5 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC14.15□□□□□ -0.14
RpgrQ9R0X5 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
RpgrQ9R0X5 Gm24245-201ENSMUST00000157318 57 ntBASIC14.15□□□□□ -0.14
RpgrQ9R0X5 Gm25349-201ENSMUST00000177728 110 ntBASIC14.15□□□□□ -0.14
RpgrQ9R0X5 Gm23616-201ENSMUST00000177797 110 ntBASIC14.15□□□□□ -0.14
RpgrQ9R0X5 Gm25871-201ENSMUST00000177816 110 ntBASIC14.15□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 54.7 ms