Protein–RNA interactions for Protein: Q9JKX8

Upk3a, Uroplakin-3a, mousemouse

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3aQ9JKX8 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Upk3aQ9JKX8 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Upk3aQ9JKX8 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Upk3aQ9JKX8 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Upk3aQ9JKX8 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC13.36□□□□□ -0.27
Upk3aQ9JKX8 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Upk3aQ9JKX8 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Upk3aQ9JKX8 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Upk3aQ9JKX8 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC13.36□□□□□ -0.27
Upk3aQ9JKX8 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC13.36□□□□□ -0.27
Upk3aQ9JKX8 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Upk3aQ9JKX8 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC13.36□□□□□ -0.27
Upk3aQ9JKX8 Gm42612-201ENSMUST00000197986 623 ntBASIC13.36□□□□□ -0.27
Upk3aQ9JKX8 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Upk3aQ9JKX8 Gm43170-201ENSMUST00000199827 612 ntBASIC13.36□□□□□ -0.27
Upk3aQ9JKX8 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC13.36□□□□□ -0.27
Upk3aQ9JKX8 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC13.36□□□□□ -0.27
Upk3aQ9JKX8 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC13.36□□□□□ -0.27
Upk3aQ9JKX8 AC139580.1-202ENSMUST00000223574 928 ntBASIC13.36□□□□□ -0.27
Upk3aQ9JKX8 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Upk3aQ9JKX8 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Upk3aQ9JKX8 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Upk3aQ9JKX8 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Upk3aQ9JKX8 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Upk3aQ9JKX8 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Upk3aQ9JKX8 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC13.36□□□□□ -0.27
Upk3aQ9JKX8 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Upk3aQ9JKX8 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Upk3aQ9JKX8 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Upk3aQ9JKX8 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Upk3aQ9JKX8 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC13.36□□□□□ -0.27
Upk3aQ9JKX8 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Upk3aQ9JKX8 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Upk3aQ9JKX8 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Upk3aQ9JKX8 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Upk3aQ9JKX8 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Upk3aQ9JKX8 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Upk3aQ9JKX8 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Upk3aQ9JKX8 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Upk3aQ9JKX8 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Upk3aQ9JKX8 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Upk3aQ9JKX8 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Upk3aQ9JKX8 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Upk3aQ9JKX8 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Upk3aQ9JKX8 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Upk3aQ9JKX8 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Upk3aQ9JKX8 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Upk3aQ9JKX8 Gm37133-201ENSMUST00000192705 1922 ntBASIC13.35□□□□□ -0.27
Upk3aQ9JKX8 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Upk3aQ9JKX8 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Upk3aQ9JKX8 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Upk3aQ9JKX8 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Upk3aQ9JKX8 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Upk3aQ9JKX8 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Upk3aQ9JKX8 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Upk3aQ9JKX8 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC13.35□□□□□ -0.27
Upk3aQ9JKX8 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC13.35□□□□□ -0.27
Upk3aQ9JKX8 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Upk3aQ9JKX8 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Upk3aQ9JKX8 Gm28760-201ENSMUST00000185995 736 ntBASIC13.35□□□□□ -0.27
Upk3aQ9JKX8 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC13.35□□□□□ -0.27
Upk3aQ9JKX8 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC13.35□□□□□ -0.27
Upk3aQ9JKX8 AC131997.1-201ENSMUST00000228611 1229 ntBASIC13.35□□□□□ -0.27
Upk3aQ9JKX8 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Upk3aQ9JKX8 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Upk3aQ9JKX8 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Upk3aQ9JKX8 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Upk3aQ9JKX8 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Upk3aQ9JKX8 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Upk3aQ9JKX8 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Upk3aQ9JKX8 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
Upk3aQ9JKX8 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Upk3aQ9JKX8 Gm38037-201ENSMUST00000192600 1624 ntBASIC13.35□□□□□ -0.27
Upk3aQ9JKX8 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Upk3aQ9JKX8 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Upk3aQ9JKX8 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Upk3aQ9JKX8 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC13.35□□□□□ -0.27
Upk3aQ9JKX8 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Upk3aQ9JKX8 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Upk3aQ9JKX8 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Upk3aQ9JKX8 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Upk3aQ9JKX8 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Upk3aQ9JKX8 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC13.34□□□□□ -0.27
Upk3aQ9JKX8 Gm43399-201ENSMUST00000202546 2374 ntBASIC13.34□□□□□ -0.27
Upk3aQ9JKX8 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Upk3aQ9JKX8 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Upk3aQ9JKX8 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Upk3aQ9JKX8 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC13.34□□□□□ -0.27
Upk3aQ9JKX8 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Upk3aQ9JKX8 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Upk3aQ9JKX8 Gm27437-201ENSMUST00000183429 107 ntBASIC13.34□□□□□ -0.27
Upk3aQ9JKX8 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Upk3aQ9JKX8 Gm31326-201ENSMUST00000191856 1048 ntBASIC13.34□□□□□ -0.27
Upk3aQ9JKX8 Gm5279-201ENSMUST00000199575 745 ntBASIC13.34□□□□□ -0.27
Upk3aQ9JKX8 Gm44855-201ENSMUST00000205725 362 ntBASIC13.34□□□□□ -0.27
Upk3aQ9JKX8 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC13.34□□□□□ -0.27
Upk3aQ9JKX8 Gm6218-201ENSMUST00000219812 628 ntBASIC13.34□□□□□ -0.27
Upk3aQ9JKX8 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Upk3aQ9JKX8 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Upk3aQ9JKX8 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms