Protein–RNA interactions for Protein: Q9ES00

Ube4b, Ubiquitin conjugation factor E4 B, mousemouse

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4bQ9ES00 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
Ube4bQ9ES00 Gm37500-201ENSMUST00000192059 1443 ntBASIC13.36□□□□□ -0.27
Ube4bQ9ES00 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ube4bQ9ES00 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC13.36□□□□□ -0.27
Ube4bQ9ES00 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ube4bQ9ES00 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ube4bQ9ES00 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ube4bQ9ES00 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Ube4bQ9ES00 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
Ube4bQ9ES00 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ube4bQ9ES00 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Ube4bQ9ES00 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ube4bQ9ES00 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ube4bQ9ES00 Nudt18-202ENSMUST00000228554 3619 ntBASIC13.36□□□□□ -0.27
Ube4bQ9ES00 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Ube4bQ9ES00 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ube4bQ9ES00 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ube4bQ9ES00 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC13.35□□□□□ -0.27
Ube4bQ9ES00 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ube4bQ9ES00 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Ube4bQ9ES00 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Ube4bQ9ES00 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ube4bQ9ES00 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Ube4bQ9ES00 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
Ube4bQ9ES00 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ube4bQ9ES00 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC13.35□□□□□ -0.27
Ube4bQ9ES00 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ube4bQ9ES00 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Ube4bQ9ES00 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC13.35□□□□□ -0.27
Ube4bQ9ES00 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ube4bQ9ES00 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Ube4bQ9ES00 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ube4bQ9ES00 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ube4bQ9ES00 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC13.35□□□□□ -0.27
Ube4bQ9ES00 Gm14042-201ENSMUST00000120139 833 ntBASIC13.35□□□□□ -0.27
Ube4bQ9ES00 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC13.35□□□□□ -0.27
Ube4bQ9ES00 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ube4bQ9ES00 Umpk-ps-201ENSMUST00000211897 827 ntBASIC13.35□□□□□ -0.27
Ube4bQ9ES00 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ube4bQ9ES00 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ube4bQ9ES00 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ube4bQ9ES00 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Ube4bQ9ES00 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ube4bQ9ES00 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Ube4bQ9ES00 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Ube4bQ9ES00 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ube4bQ9ES00 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Ube4bQ9ES00 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Ube4bQ9ES00 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Ube4bQ9ES00 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ube4bQ9ES00 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
Ube4bQ9ES00 Gm43061-201ENSMUST00000198850 2241 ntBASIC13.35□□□□□ -0.27
Ube4bQ9ES00 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ube4bQ9ES00 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Ube4bQ9ES00 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ube4bQ9ES00 Gm10729-202ENSMUST00000193403 1375 ntBASIC13.34□□□□□ -0.27
Ube4bQ9ES00 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ube4bQ9ES00 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ube4bQ9ES00 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ube4bQ9ES00 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ube4bQ9ES00 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ube4bQ9ES00 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ube4bQ9ES00 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ube4bQ9ES00 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ube4bQ9ES00 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC13.34□□□□□ -0.27
Ube4bQ9ES00 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC13.34□□□□□ -0.27
Ube4bQ9ES00 Gm11453-201ENSMUST00000117318 1007 ntBASIC13.34□□□□□ -0.27
Ube4bQ9ES00 Gm7222-201ENSMUST00000117512 906 ntBASIC13.34□□□□□ -0.27
Ube4bQ9ES00 Gm11185-201ENSMUST00000117732 1007 ntBASIC13.34□□□□□ -0.27
Ube4bQ9ES00 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Ube4bQ9ES00 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC13.34□□□□□ -0.27
Ube4bQ9ES00 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC13.34□□□□□ -0.27
Ube4bQ9ES00 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC13.34□□□□□ -0.27
Ube4bQ9ES00 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ube4bQ9ES00 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ube4bQ9ES00 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ube4bQ9ES00 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ube4bQ9ES00 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Ube4bQ9ES00 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Ube4bQ9ES00 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC13.34□□□□□ -0.27
Ube4bQ9ES00 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Ube4bQ9ES00 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ube4bQ9ES00 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ube4bQ9ES00 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ube4bQ9ES00 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ube4bQ9ES00 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Ube4bQ9ES00 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ube4bQ9ES00 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ube4bQ9ES00 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC13.34□□□□□ -0.27
Ube4bQ9ES00 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Ube4bQ9ES00 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Ube4bQ9ES00 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Ube4bQ9ES00 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC13.33□□□□□ -0.27
Ube4bQ9ES00 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Ube4bQ9ES00 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ube4bQ9ES00 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ube4bQ9ES00 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ube4bQ9ES00 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Ube4bQ9ES00 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Ube4bQ9ES00 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 54 ms