Protein–RNA interactions for Protein: Q9D7S9

Chmp5, Charged multivesicular body protein 5, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp5Q9D7S9 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Chmp5Q9D7S9 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Chmp5Q9D7S9 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
Chmp5Q9D7S9 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Chmp5Q9D7S9 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
Chmp5Q9D7S9 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Chmp5Q9D7S9 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Chmp5Q9D7S9 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Chmp5Q9D7S9 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC17.39■□□□□ 0.37
Chmp5Q9D7S9 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.37
Chmp5Q9D7S9 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Chmp5Q9D7S9 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Chmp5Q9D7S9 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Chmp5Q9D7S9 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Chmp5Q9D7S9 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Chmp5Q9D7S9 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC17.39■□□□□ 0.37
Chmp5Q9D7S9 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC17.39■□□□□ 0.37
Chmp5Q9D7S9 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC17.39■□□□□ 0.37
Chmp5Q9D7S9 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Chmp5Q9D7S9 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Chmp5Q9D7S9 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Chmp5Q9D7S9 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Chmp5Q9D7S9 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Chmp5Q9D7S9 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Chmp5Q9D7S9 AC131586.3-201ENSMUST00000228355 1367 ntBASIC17.39■□□□□ 0.37
Chmp5Q9D7S9 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Chmp5Q9D7S9 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Chmp5Q9D7S9 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Chmp5Q9D7S9 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Chmp5Q9D7S9 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Chmp5Q9D7S9 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Chmp5Q9D7S9 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Chmp5Q9D7S9 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Chmp5Q9D7S9 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Chmp5Q9D7S9 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Chmp5Q9D7S9 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Chmp5Q9D7S9 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Chmp5Q9D7S9 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Chmp5Q9D7S9 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Chmp5Q9D7S9 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Chmp5Q9D7S9 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC17.38■□□□□ 0.37
Chmp5Q9D7S9 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Chmp5Q9D7S9 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Chmp5Q9D7S9 Gm29310-201ENSMUST00000185468 696 ntBASIC17.38■□□□□ 0.37
Chmp5Q9D7S9 Gm21825-201ENSMUST00000185728 696 ntBASIC17.38■□□□□ 0.37
Chmp5Q9D7S9 Gm29109-201ENSMUST00000185895 696 ntBASIC17.38■□□□□ 0.37
Chmp5Q9D7S9 Gm21896-201ENSMUST00000186520 696 ntBASIC17.38■□□□□ 0.37
Chmp5Q9D7S9 Gm21873-201ENSMUST00000186728 696 ntBASIC17.38■□□□□ 0.37
Chmp5Q9D7S9 Gm21794-201ENSMUST00000187056 696 ntBASIC17.38■□□□□ 0.37
Chmp5Q9D7S9 Gm21880-201ENSMUST00000187275 696 ntBASIC17.38■□□□□ 0.37
Chmp5Q9D7S9 Gm21826-201ENSMUST00000187451 696 ntBASIC17.38■□□□□ 0.37
Chmp5Q9D7S9 Gm21198-201ENSMUST00000188393 696 ntBASIC17.38■□□□□ 0.37
Chmp5Q9D7S9 Gm21749-201ENSMUST00000189343 696 ntBASIC17.38■□□□□ 0.37
Chmp5Q9D7S9 Gm21901-201ENSMUST00000189568 696 ntBASIC17.38■□□□□ 0.37
Chmp5Q9D7S9 Gm29424-201ENSMUST00000189716 696 ntBASIC17.38■□□□□ 0.37
Chmp5Q9D7S9 Gm28599-201ENSMUST00000189838 694 ntBASIC17.38■□□□□ 0.37
Chmp5Q9D7S9 Gm21867-201ENSMUST00000189917 696 ntBASIC17.38■□□□□ 0.37
Chmp5Q9D7S9 Gm29269-201ENSMUST00000190087 696 ntBASIC17.38■□□□□ 0.37
Chmp5Q9D7S9 Gm21722-201ENSMUST00000190153 696 ntBASIC17.38■□□□□ 0.37
Chmp5Q9D7S9 Gm28423-201ENSMUST00000190701 696 ntBASIC17.38■□□□□ 0.37
Chmp5Q9D7S9 Gm21899-201ENSMUST00000190745 696 ntBASIC17.38■□□□□ 0.37
Chmp5Q9D7S9 Gm21910-201ENSMUST00000191163 696 ntBASIC17.38■□□□□ 0.37
Chmp5Q9D7S9 Gm21849-201ENSMUST00000191571 696 ntBASIC17.38■□□□□ 0.37
Chmp5Q9D7S9 Gm28678-201ENSMUST00000191593 696 ntBASIC17.38■□□□□ 0.37
Chmp5Q9D7S9 Gm20910-201ENSMUST00000193268 696 ntBASIC17.38■□□□□ 0.37
Chmp5Q9D7S9 Gm21871-201ENSMUST00000194621 696 ntBASIC17.38■□□□□ 0.37
Chmp5Q9D7S9 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC17.38■□□□□ 0.37
Chmp5Q9D7S9 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC17.38■□□□□ 0.37
Chmp5Q9D7S9 AC139350.3-201ENSMUST00000226151 420 ntBASIC17.38■□□□□ 0.37
Chmp5Q9D7S9 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC17.38■□□□□ 0.37
Chmp5Q9D7S9 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Chmp5Q9D7S9 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Chmp5Q9D7S9 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Chmp5Q9D7S9 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Chmp5Q9D7S9 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC17.38■□□□□ 0.37
Chmp5Q9D7S9 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC17.38■□□□□ 0.37
Chmp5Q9D7S9 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Chmp5Q9D7S9 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Chmp5Q9D7S9 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC17.37■□□□□ 0.37
Chmp5Q9D7S9 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Chmp5Q9D7S9 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Chmp5Q9D7S9 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Chmp5Q9D7S9 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Chmp5Q9D7S9 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Chmp5Q9D7S9 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Chmp5Q9D7S9 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Chmp5Q9D7S9 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Chmp5Q9D7S9 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC17.37■□□□□ 0.37
Chmp5Q9D7S9 Gm18733-201ENSMUST00000173950 856 ntBASIC17.37■□□□□ 0.37
Chmp5Q9D7S9 Ighv8-14-201ENSMUST00000196781 358 ntBASIC17.37■□□□□ 0.37
Chmp5Q9D7S9 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Chmp5Q9D7S9 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Chmp5Q9D7S9 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Chmp5Q9D7S9 Gpr146-202ENSMUST00000053120 1040 ntBASIC17.37■□□□□ 0.37
Chmp5Q9D7S9 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Chmp5Q9D7S9 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Chmp5Q9D7S9 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Chmp5Q9D7S9 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Chmp5Q9D7S9 CT025610.1-201ENSMUST00000224552 1786 ntBASIC17.37■□□□□ 0.37
Chmp5Q9D7S9 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms