Protein–RNA interactions for Protein: Q9D0F1

Ndc80, Kinetochore protein NDC80 homolog, mousemouse

Known RBP Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc80Q9D0F1 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC14.17□□□□□ -0.14
Ndc80Q9D0F1 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ndc80Q9D0F1 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Ndc80Q9D0F1 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ndc80Q9D0F1 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ndc80Q9D0F1 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ndc80Q9D0F1 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ndc80Q9D0F1 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ndc80Q9D0F1 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ndc80Q9D0F1 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ndc80Q9D0F1 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ndc80Q9D0F1 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ndc80Q9D0F1 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ndc80Q9D0F1 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC14.16□□□□□ -0.14
Ndc80Q9D0F1 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ndc80Q9D0F1 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ndc80Q9D0F1 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC14.16□□□□□ -0.14
Ndc80Q9D0F1 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Ndc80Q9D0F1 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ndc80Q9D0F1 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ndc80Q9D0F1 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ndc80Q9D0F1 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC14.16□□□□□ -0.14
Ndc80Q9D0F1 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ndc80Q9D0F1 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ndc80Q9D0F1 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
Ndc80Q9D0F1 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC14.16□□□□□ -0.14
Ndc80Q9D0F1 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ndc80Q9D0F1 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ndc80Q9D0F1 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Ndc80Q9D0F1 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ndc80Q9D0F1 Gm12500-202ENSMUST00000186471 2428 ntBASIC14.16□□□□□ -0.14
Ndc80Q9D0F1 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Ndc80Q9D0F1 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ndc80Q9D0F1 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ndc80Q9D0F1 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC14.16□□□□□ -0.14
Ndc80Q9D0F1 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ndc80Q9D0F1 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC14.16□□□□□ -0.14
Ndc80Q9D0F1 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ndc80Q9D0F1 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ndc80Q9D0F1 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ndc80Q9D0F1 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ndc80Q9D0F1 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Ndc80Q9D0F1 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Ndc80Q9D0F1 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ndc80Q9D0F1 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ndc80Q9D0F1 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ndc80Q9D0F1 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ndc80Q9D0F1 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ndc80Q9D0F1 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ndc80Q9D0F1 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ndc80Q9D0F1 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ndc80Q9D0F1 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ndc80Q9D0F1 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ndc80Q9D0F1 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Ndc80Q9D0F1 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ndc80Q9D0F1 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ndc80Q9D0F1 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ndc80Q9D0F1 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ndc80Q9D0F1 Gm24543-201ENSMUST00000103867 82 ntBASIC14.15□□□□□ -0.14
Ndc80Q9D0F1 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC14.15□□□□□ -0.14
Ndc80Q9D0F1 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ndc80Q9D0F1 Gm8584-201ENSMUST00000171982 758 ntBASIC14.15□□□□□ -0.14
Ndc80Q9D0F1 Gm22175-201ENSMUST00000175007 78 ntBASIC14.15□□□□□ -0.14
Ndc80Q9D0F1 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Ndc80Q9D0F1 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ndc80Q9D0F1 Gm44608-201ENSMUST00000206827 855 ntBASIC14.15□□□□□ -0.14
Ndc80Q9D0F1 Dupd1-202ENSMUST00000224735 548 ntBASIC14.15□□□□□ -0.14
Ndc80Q9D0F1 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ndc80Q9D0F1 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ndc80Q9D0F1 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ndc80Q9D0F1 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ndc80Q9D0F1 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ndc80Q9D0F1 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Ndc80Q9D0F1 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
Ndc80Q9D0F1 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ndc80Q9D0F1 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ndc80Q9D0F1 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ndc80Q9D0F1 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ndc80Q9D0F1 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ndc80Q9D0F1 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ndc80Q9D0F1 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ndc80Q9D0F1 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ndc80Q9D0F1 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Ndc80Q9D0F1 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC14.15□□□□□ -0.14
Ndc80Q9D0F1 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Ndc80Q9D0F1 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ndc80Q9D0F1 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ndc80Q9D0F1 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC14.15□□□□□ -0.14
Ndc80Q9D0F1 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ndc80Q9D0F1 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ndc80Q9D0F1 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ndc80Q9D0F1 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ndc80Q9D0F1 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Ndc80Q9D0F1 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ndc80Q9D0F1 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.15
Ndc80Q9D0F1 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Ndc80Q9D0F1 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ndc80Q9D0F1 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ndc80Q9D0F1 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ndc80Q9D0F1 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms