Protein–RNA interactions for Protein: Q9CZ83

Mrpl55, 39S ribosomal protein L55, mitochondrial, mousemouse

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mrpl55Q9CZ83 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Mrpl55Q9CZ83 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Mrpl55Q9CZ83 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC9.25□□□□□ -0.93
Mrpl55Q9CZ83 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Mrpl55Q9CZ83 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC9.25□□□□□ -0.93
Mrpl55Q9CZ83 H2af-ps-201ENSMUST00000119066 295 ntBASIC9.25□□□□□ -0.93
Mrpl55Q9CZ83 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC9.25□□□□□ -0.93
Mrpl55Q9CZ83 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Mrpl55Q9CZ83 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Mrpl55Q9CZ83 Gm25911-201ENSMUST00000157621 56 ntBASIC9.25□□□□□ -0.93
Mrpl55Q9CZ83 Gm25925-201ENSMUST00000158314 306 ntBASIC9.25□□□□□ -0.93
Mrpl55Q9CZ83 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC9.25□□□□□ -0.93
Mrpl55Q9CZ83 AC159295.1-201ENSMUST00000225326 940 ntBASIC9.25□□□□□ -0.93
Mrpl55Q9CZ83 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC9.25□□□□□ -0.93
Mrpl55Q9CZ83 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Mrpl55Q9CZ83 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Mrpl55Q9CZ83 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC9.25□□□□□ -0.93
Mrpl55Q9CZ83 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC9.25□□□□□ -0.93
Mrpl55Q9CZ83 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC9.25□□□□□ -0.93
Mrpl55Q9CZ83 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Mrpl55Q9CZ83 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Mrpl55Q9CZ83 Megf11-201ENSMUST00000068967 6680 ntTSL 2 BASIC9.25□□□□□ -0.93
Mrpl55Q9CZ83 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Mrpl55Q9CZ83 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Mrpl55Q9CZ83 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC9.25□□□□□ -0.93
Mrpl55Q9CZ83 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Mrpl55Q9CZ83 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Mrpl55Q9CZ83 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC9.25□□□□□ -0.93
Mrpl55Q9CZ83 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Mrpl55Q9CZ83 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC9.25□□□□□ -0.93
Mrpl55Q9CZ83 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC9.25□□□□□ -0.93
Mrpl55Q9CZ83 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC9.25□□□□□ -0.93
Mrpl55Q9CZ83 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Mrpl55Q9CZ83 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Mrpl55Q9CZ83 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Mrpl55Q9CZ83 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC9.25□□□□□ -0.93
Mrpl55Q9CZ83 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Mrpl55Q9CZ83 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC9.25□□□□□ -0.93
Mrpl55Q9CZ83 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Mrpl55Q9CZ83 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Mrpl55Q9CZ83 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Mrpl55Q9CZ83 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Mrpl55Q9CZ83 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC9.24□□□□□ -0.93
Mrpl55Q9CZ83 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Mrpl55Q9CZ83 Col24a1-201ENSMUST00000029848 7143 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Mrpl55Q9CZ83 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Mrpl55Q9CZ83 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC9.24□□□□□ -0.93
Mrpl55Q9CZ83 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC9.24□□□□□ -0.93
Mrpl55Q9CZ83 Fads6-201ENSMUST00000056153 4951 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Mrpl55Q9CZ83 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC9.24□□□□□ -0.93
Mrpl55Q9CZ83 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Mrpl55Q9CZ83 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Mrpl55Q9CZ83 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC9.24□□□□□ -0.93
Mrpl55Q9CZ83 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Mrpl55Q9CZ83 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Mrpl55Q9CZ83 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Mrpl55Q9CZ83 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Mrpl55Q9CZ83 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Mrpl55Q9CZ83 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC9.24□□□□□ -0.93
Mrpl55Q9CZ83 Amotl1-201ENSMUST00000013220 8957 ntAPPRIS P2 TSL 1 (best) BASIC9.24□□□□□ -0.93
Mrpl55Q9CZ83 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Mrpl55Q9CZ83 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC9.24□□□□□ -0.93
Mrpl55Q9CZ83 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Mrpl55Q9CZ83 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Mrpl55Q9CZ83 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC9.24□□□□□ -0.93
Mrpl55Q9CZ83 Vmn2r-ps25-201ENSMUST00000202322 2321 ntBASIC9.24□□□□□ -0.93
Mrpl55Q9CZ83 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC9.24□□□□□ -0.93
Mrpl55Q9CZ83 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC9.24□□□□□ -0.93
Mrpl55Q9CZ83 Gm4995-201ENSMUST00000117247 432 ntBASIC9.24□□□□□ -0.93
Mrpl55Q9CZ83 Mir1895-201ENSMUST00000122615 79 ntBASIC9.24□□□□□ -0.93
Mrpl55Q9CZ83 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Mrpl55Q9CZ83 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC9.24□□□□□ -0.93
Mrpl55Q9CZ83 Gm44414-201ENSMUST00000203660 2109 ntBASIC9.24□□□□□ -0.93
Mrpl55Q9CZ83 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Mrpl55Q9CZ83 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC9.24□□□□□ -0.93
Mrpl55Q9CZ83 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Mrpl55Q9CZ83 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Mrpl55Q9CZ83 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC9.24□□□□□ -0.93
Mrpl55Q9CZ83 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC9.24□□□□□ -0.93
Mrpl55Q9CZ83 Gm13294-201ENSMUST00000121757 1330 ntBASIC9.24□□□□□ -0.93
Mrpl55Q9CZ83 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Mrpl55Q9CZ83 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC9.24□□□□□ -0.93
Mrpl55Q9CZ83 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Mrpl55Q9CZ83 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC9.24□□□□□ -0.93
Mrpl55Q9CZ83 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC9.24□□□□□ -0.93
Mrpl55Q9CZ83 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Mrpl55Q9CZ83 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC9.24□□□□□ -0.93
Mrpl55Q9CZ83 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC9.24□□□□□ -0.93
Mrpl55Q9CZ83 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC9.24□□□□□ -0.93
Mrpl55Q9CZ83 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Mrpl55Q9CZ83 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Mrpl55Q9CZ83 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC9.24□□□□□ -0.93
Mrpl55Q9CZ83 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC9.23□□□□□ -0.93
Mrpl55Q9CZ83 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC9.23□□□□□ -0.93
Mrpl55Q9CZ83 Spata13-207ENSMUST00000160973 7467 ntAPPRIS P3 TSL 1 (best) BASIC9.23□□□□□ -0.93
Mrpl55Q9CZ83 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Mrpl55Q9CZ83 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC9.23□□□□□ -0.93
Mrpl55Q9CZ83 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Mrpl55Q9CZ83 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Mrpl55Q9CZ83 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Retrieved 100 of 76,532 protein–RNA pairs in 87 ms