Protein–RNA interactions for Protein: Q9CQX5

Cldnd1, Claudin domain-containing protein 1, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldnd1Q9CQX5 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cldnd1Q9CQX5 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cldnd1Q9CQX5 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cldnd1Q9CQX5 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cldnd1Q9CQX5 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Cldnd1Q9CQX5 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cldnd1Q9CQX5 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cldnd1Q9CQX5 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC14.15□□□□□ -0.14
Cldnd1Q9CQX5 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC14.15□□□□□ -0.14
Cldnd1Q9CQX5 Gm5637-201ENSMUST00000153890 1119 ntBASIC14.15□□□□□ -0.14
Cldnd1Q9CQX5 Gm7895-201ENSMUST00000187459 1173 ntBASIC14.15□□□□□ -0.14
Cldnd1Q9CQX5 Gm29608-201ENSMUST00000190444 463 ntBASIC14.15□□□□□ -0.14
Cldnd1Q9CQX5 Gm37259-201ENSMUST00000193903 849 ntBASIC14.15□□□□□ -0.14
Cldnd1Q9CQX5 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC14.15□□□□□ -0.14
Cldnd1Q9CQX5 4933424G06Rik-204ENSMUST00000208994 1120 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cldnd1Q9CQX5 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cldnd1Q9CQX5 AC154462.2-201ENSMUST00000227519 370 ntBASIC14.15□□□□□ -0.14
Cldnd1Q9CQX5 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cldnd1Q9CQX5 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC14.15□□□□□ -0.14
Cldnd1Q9CQX5 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Cldnd1Q9CQX5 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cldnd1Q9CQX5 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cldnd1Q9CQX5 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cldnd1Q9CQX5 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Cldnd1Q9CQX5 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cldnd1Q9CQX5 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cldnd1Q9CQX5 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cldnd1Q9CQX5 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cldnd1Q9CQX5 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cldnd1Q9CQX5 Gm6203-201ENSMUST00000209575 1342 ntBASIC14.15□□□□□ -0.15
Cldnd1Q9CQX5 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC14.15□□□□□ -0.15
Cldnd1Q9CQX5 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
Cldnd1Q9CQX5 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Cldnd1Q9CQX5 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cldnd1Q9CQX5 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cldnd1Q9CQX5 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Cldnd1Q9CQX5 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cldnd1Q9CQX5 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Cldnd1Q9CQX5 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Cldnd1Q9CQX5 Gm8706-201ENSMUST00000197372 1491 ntBASIC14.14□□□□□ -0.15
Cldnd1Q9CQX5 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cldnd1Q9CQX5 Carlr-201ENSMUST00000181515 2574 ntBASIC14.14□□□□□ -0.15
Cldnd1Q9CQX5 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Cldnd1Q9CQX5 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cldnd1Q9CQX5 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Cldnd1Q9CQX5 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC14.14□□□□□ -0.15
Cldnd1Q9CQX5 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cldnd1Q9CQX5 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cldnd1Q9CQX5 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC14.14□□□□□ -0.15
Cldnd1Q9CQX5 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Cldnd1Q9CQX5 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
Cldnd1Q9CQX5 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC14.14□□□□□ -0.15
Cldnd1Q9CQX5 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cldnd1Q9CQX5 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Cldnd1Q9CQX5 Gm37922-201ENSMUST00000195596 455 ntBASIC14.14□□□□□ -0.15
Cldnd1Q9CQX5 Gm37497-201ENSMUST00000195830 798 ntBASIC14.14□□□□□ -0.15
Cldnd1Q9CQX5 Tyms-ps-201ENSMUST00000219550 915 ntBASIC14.14□□□□□ -0.15
Cldnd1Q9CQX5 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cldnd1Q9CQX5 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cldnd1Q9CQX5 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cldnd1Q9CQX5 Rn7sk-201ENSMUST00000083103 331 ntBASIC14.14□□□□□ -0.15
Cldnd1Q9CQX5 Gm26315-201ENSMUST00000083890 321 ntBASIC14.14□□□□□ -0.15
Cldnd1Q9CQX5 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cldnd1Q9CQX5 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Cldnd1Q9CQX5 Ssr1-204ENSMUST00000225319 1610 ntBASIC14.14□□□□□ -0.15
Cldnd1Q9CQX5 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Cldnd1Q9CQX5 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cldnd1Q9CQX5 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC14.14□□□□□ -0.15
Cldnd1Q9CQX5 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cldnd1Q9CQX5 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC14.14□□□□□ -0.15
Cldnd1Q9CQX5 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cldnd1Q9CQX5 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cldnd1Q9CQX5 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Cldnd1Q9CQX5 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cldnd1Q9CQX5 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cldnd1Q9CQX5 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Cldnd1Q9CQX5 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC14.13□□□□□ -0.15
Cldnd1Q9CQX5 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cldnd1Q9CQX5 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cldnd1Q9CQX5 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Cldnd1Q9CQX5 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cldnd1Q9CQX5 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Cldnd1Q9CQX5 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cldnd1Q9CQX5 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC14.13□□□□□ -0.15
Cldnd1Q9CQX5 Gm14381-201ENSMUST00000122105 414 ntBASIC14.13□□□□□ -0.15
Cldnd1Q9CQX5 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC14.13□□□□□ -0.15
Cldnd1Q9CQX5 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Cldnd1Q9CQX5 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Cldnd1Q9CQX5 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cldnd1Q9CQX5 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cldnd1Q9CQX5 Gm25261-201ENSMUST00000157416 134 ntBASIC14.13□□□□□ -0.15
Cldnd1Q9CQX5 Gm2991-201ENSMUST00000173338 480 ntBASIC14.13□□□□□ -0.15
Cldnd1Q9CQX5 Mir7070-201ENSMUST00000183657 86 ntBASIC14.13□□□□□ -0.15
Cldnd1Q9CQX5 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC14.13□□□□□ -0.15
Cldnd1Q9CQX5 Gm10146-201ENSMUST00000072739 309 ntBASIC14.13□□□□□ -0.15
Cldnd1Q9CQX5 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Cldnd1Q9CQX5 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cldnd1Q9CQX5 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cldnd1Q9CQX5 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cldnd1Q9CQX5 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms