Protein–RNA interactions for Protein: Q9CQ70

H2afb1, Histone H2A-Bbd type 1, mousemouse

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1Q9CQ70 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
H2afb1Q9CQ70 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
H2afb1Q9CQ70 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
H2afb1Q9CQ70 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
H2afb1Q9CQ70 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
H2afb1Q9CQ70 Gm22065-201ENSMUST00000103753 110 ntBASIC11.39□□□□□ -0.59
H2afb1Q9CQ70 Gm22066-201ENSMUST00000103761 110 ntBASIC11.39□□□□□ -0.59
H2afb1Q9CQ70 Gm24932-201ENSMUST00000103763 110 ntBASIC11.39□□□□□ -0.59
H2afb1Q9CQ70 Gm24115-201ENSMUST00000103799 110 ntBASIC11.39□□□□□ -0.59
H2afb1Q9CQ70 Gm22190-201ENSMUST00000103827 110 ntBASIC11.39□□□□□ -0.59
H2afb1Q9CQ70 Gm22191-201ENSMUST00000103831 110 ntBASIC11.39□□□□□ -0.59
H2afb1Q9CQ70 Gm24721-201ENSMUST00000103849 110 ntBASIC11.39□□□□□ -0.59
H2afb1Q9CQ70 Gm28018-201ENSMUST00000103869 110 ntBASIC11.39□□□□□ -0.59
H2afb1Q9CQ70 Gm26399-201ENSMUST00000103937 110 ntBASIC11.39□□□□□ -0.59
H2afb1Q9CQ70 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
H2afb1Q9CQ70 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
H2afb1Q9CQ70 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
H2afb1Q9CQ70 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
H2afb1Q9CQ70 Gm24158-201ENSMUST00000175263 71 ntBASIC11.39□□□□□ -0.59
H2afb1Q9CQ70 Gm25349-201ENSMUST00000177728 110 ntBASIC11.39□□□□□ -0.59
H2afb1Q9CQ70 Gm23616-201ENSMUST00000177797 110 ntBASIC11.39□□□□□ -0.59
H2afb1Q9CQ70 Gm25871-201ENSMUST00000177816 110 ntBASIC11.39□□□□□ -0.59
H2afb1Q9CQ70 Gm24752-201ENSMUST00000178240 110 ntBASIC11.39□□□□□ -0.59
H2afb1Q9CQ70 Gm24496-201ENSMUST00000178287 110 ntBASIC11.39□□□□□ -0.59
H2afb1Q9CQ70 Gm25649-201ENSMUST00000178476 110 ntBASIC11.39□□□□□ -0.59
H2afb1Q9CQ70 Gm25548-201ENSMUST00000178681 110 ntBASIC11.39□□□□□ -0.59
H2afb1Q9CQ70 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC11.39□□□□□ -0.59
H2afb1Q9CQ70 Gm23147-201ENSMUST00000178841 110 ntBASIC11.39□□□□□ -0.59
H2afb1Q9CQ70 Gm26095-201ENSMUST00000179270 110 ntBASIC11.39□□□□□ -0.59
H2afb1Q9CQ70 Gm22171-201ENSMUST00000179283 110 ntBASIC11.39□□□□□ -0.59
H2afb1Q9CQ70 Gm23936-201ENSMUST00000179354 110 ntBASIC11.39□□□□□ -0.59
H2afb1Q9CQ70 Gm22619-201ENSMUST00000179516 110 ntBASIC11.39□□□□□ -0.59
H2afb1Q9CQ70 Gm25255-201ENSMUST00000179579 110 ntBASIC11.39□□□□□ -0.59
H2afb1Q9CQ70 Gm24755-201ENSMUST00000179691 110 ntBASIC11.39□□□□□ -0.59
H2afb1Q9CQ70 Gm26506-201ENSMUST00000179692 110 ntBASIC11.39□□□□□ -0.59
H2afb1Q9CQ70 Gm25086-201ENSMUST00000179931 110 ntBASIC11.39□□□□□ -0.59
H2afb1Q9CQ70 Gm23243-201ENSMUST00000180047 110 ntBASIC11.39□□□□□ -0.59
H2afb1Q9CQ70 Gm24659-201ENSMUST00000180212 110 ntBASIC11.39□□□□□ -0.59
H2afb1Q9CQ70 Gm24169-201ENSMUST00000180244 110 ntBASIC11.39□□□□□ -0.59
H2afb1Q9CQ70 Gm23689-201ENSMUST00000180354 110 ntBASIC11.39□□□□□ -0.59
H2afb1Q9CQ70 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC11.39□□□□□ -0.59
H2afb1Q9CQ70 Gm27359-201ENSMUST00000184153 110 ntBASIC11.39□□□□□ -0.59
H2afb1Q9CQ70 Gm27785-201ENSMUST00000184268 110 ntBASIC11.39□□□□□ -0.59
H2afb1Q9CQ70 Gm27466-201ENSMUST00000184396 110 ntBASIC11.39□□□□□ -0.59
H2afb1Q9CQ70 Gm27703-201ENSMUST00000184836 110 ntBASIC11.39□□□□□ -0.59
H2afb1Q9CQ70 Gm18766-201ENSMUST00000189811 808 ntBASIC11.39□□□□□ -0.59
H2afb1Q9CQ70 Gm29741-201ENSMUST00000192667 421 ntBASIC11.39□□□□□ -0.59
H2afb1Q9CQ70 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
H2afb1Q9CQ70 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
H2afb1Q9CQ70 Ighv1-25-201ENSMUST00000195638 345 ntBASIC11.39□□□□□ -0.59
H2afb1Q9CQ70 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
H2afb1Q9CQ70 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
H2afb1Q9CQ70 AC225888.1-201ENSMUST00000227184 728 ntBASIC11.39□□□□□ -0.59
H2afb1Q9CQ70 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
H2afb1Q9CQ70 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
H2afb1Q9CQ70 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
H2afb1Q9CQ70 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
H2afb1Q9CQ70 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
H2afb1Q9CQ70 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
H2afb1Q9CQ70 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC11.39□□□□□ -0.59
H2afb1Q9CQ70 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
H2afb1Q9CQ70 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
H2afb1Q9CQ70 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC11.39□□□□□ -0.59
H2afb1Q9CQ70 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
H2afb1Q9CQ70 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
H2afb1Q9CQ70 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
H2afb1Q9CQ70 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
H2afb1Q9CQ70 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
H2afb1Q9CQ70 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
H2afb1Q9CQ70 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
H2afb1Q9CQ70 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
H2afb1Q9CQ70 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC11.39□□□□□ -0.59
H2afb1Q9CQ70 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC11.39□□□□□ -0.59
H2afb1Q9CQ70 Gm10729-202ENSMUST00000193403 1375 ntBASIC11.39□□□□□ -0.59
H2afb1Q9CQ70 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
H2afb1Q9CQ70 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
H2afb1Q9CQ70 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
H2afb1Q9CQ70 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
H2afb1Q9CQ70 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
H2afb1Q9CQ70 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
H2afb1Q9CQ70 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
H2afb1Q9CQ70 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC11.38□□□□□ -0.59
H2afb1Q9CQ70 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
H2afb1Q9CQ70 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC11.38□□□□□ -0.59
H2afb1Q9CQ70 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
H2afb1Q9CQ70 Gm5422-201ENSMUST00000050717 2721 ntBASIC11.38□□□□□ -0.59
H2afb1Q9CQ70 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
H2afb1Q9CQ70 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
H2afb1Q9CQ70 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
H2afb1Q9CQ70 CT030684.3-201ENSMUST00000227308 2445 ntBASIC11.38□□□□□ -0.59
H2afb1Q9CQ70 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
H2afb1Q9CQ70 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
H2afb1Q9CQ70 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
H2afb1Q9CQ70 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
H2afb1Q9CQ70 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
H2afb1Q9CQ70 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
H2afb1Q9CQ70 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
H2afb1Q9CQ70 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
H2afb1Q9CQ70 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
H2afb1Q9CQ70 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 46.1 ms