Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC15.87■□□□□ 0.13
Trim11Q99PQ2 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Trim11Q99PQ2 Gm6736-201ENSMUST00000166583 948 ntBASIC15.87■□□□□ 0.13
Trim11Q99PQ2 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
Trim11Q99PQ2 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trim11Q99PQ2 Gm29741-201ENSMUST00000192667 421 ntBASIC15.87■□□□□ 0.13
Trim11Q99PQ2 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC15.87■□□□□ 0.13
Trim11Q99PQ2 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Trim11Q99PQ2 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC15.87■□□□□ 0.13
Trim11Q99PQ2 AC149294.4-201ENSMUST00000227870 882 ntBASIC15.87■□□□□ 0.13
Trim11Q99PQ2 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Trim11Q99PQ2 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trim11Q99PQ2 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trim11Q99PQ2 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC15.87■□□□□ 0.13
Trim11Q99PQ2 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trim11Q99PQ2 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
Trim11Q99PQ2 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC15.87■□□□□ 0.13
Trim11Q99PQ2 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
Trim11Q99PQ2 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trim11Q99PQ2 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trim11Q99PQ2 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC15.87■□□□□ 0.13
Trim11Q99PQ2 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
Trim11Q99PQ2 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trim11Q99PQ2 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trim11Q99PQ2 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Trim11Q99PQ2 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Trim11Q99PQ2 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Trim11Q99PQ2 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trim11Q99PQ2 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trim11Q99PQ2 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trim11Q99PQ2 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trim11Q99PQ2 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trim11Q99PQ2 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Trim11Q99PQ2 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trim11Q99PQ2 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC15.86■□□□□ 0.13
Trim11Q99PQ2 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trim11Q99PQ2 Gm6415-201ENSMUST00000118488 348 ntBASIC15.86■□□□□ 0.13
Trim11Q99PQ2 Gm15693-201ENSMUST00000120470 637 ntBASIC15.86■□□□□ 0.13
Trim11Q99PQ2 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trim11Q99PQ2 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Trim11Q99PQ2 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC15.86■□□□□ 0.13
Trim11Q99PQ2 Gm27702-201ENSMUST00000184512 56 ntBASIC15.86■□□□□ 0.13
Trim11Q99PQ2 Gm6916-202ENSMUST00000205523 195 ntBASIC15.86■□□□□ 0.13
Trim11Q99PQ2 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trim11Q99PQ2 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
Trim11Q99PQ2 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Trim11Q99PQ2 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trim11Q99PQ2 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
Trim11Q99PQ2 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC15.86■□□□□ 0.13
Trim11Q99PQ2 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trim11Q99PQ2 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Trim11Q99PQ2 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
Trim11Q99PQ2 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC15.86■□□□□ 0.13
Trim11Q99PQ2 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trim11Q99PQ2 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trim11Q99PQ2 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trim11Q99PQ2 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trim11Q99PQ2 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC15.86■□□□□ 0.13
Trim11Q99PQ2 Il17rd-203ENSMUST00000225146 3366 ntBASIC15.86■□□□□ 0.13
Trim11Q99PQ2 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trim11Q99PQ2 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trim11Q99PQ2 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trim11Q99PQ2 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trim11Q99PQ2 AC114543.1-201ENSMUST00000226451 1558 ntBASIC15.85■□□□□ 0.13
Trim11Q99PQ2 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trim11Q99PQ2 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Trim11Q99PQ2 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
Trim11Q99PQ2 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trim11Q99PQ2 Gm8410-201ENSMUST00000117225 605 ntBASIC15.85■□□□□ 0.13
Trim11Q99PQ2 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC15.85■□□□□ 0.13
Trim11Q99PQ2 Gm12428-201ENSMUST00000119844 727 ntBASIC15.85■□□□□ 0.13
Trim11Q99PQ2 Gm28630-201ENSMUST00000187806 498 ntBASIC15.85■□□□□ 0.13
Trim11Q99PQ2 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trim11Q99PQ2 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trim11Q99PQ2 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trim11Q99PQ2 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trim11Q99PQ2 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC15.85■□□□□ 0.13
Trim11Q99PQ2 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Trim11Q99PQ2 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trim11Q99PQ2 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trim11Q99PQ2 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trim11Q99PQ2 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trim11Q99PQ2 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trim11Q99PQ2 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC15.85■□□□□ 0.13
Trim11Q99PQ2 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
Trim11Q99PQ2 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trim11Q99PQ2 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Trim11Q99PQ2 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC15.85■□□□□ 0.13
Trim11Q99PQ2 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trim11Q99PQ2 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trim11Q99PQ2 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trim11Q99PQ2 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Trim11Q99PQ2 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trim11Q99PQ2 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trim11Q99PQ2 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trim11Q99PQ2 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC15.84■□□□□ 0.13
Trim11Q99PQ2 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trim11Q99PQ2 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trim11Q99PQ2 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Trim11Q99PQ2 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms