Protein–RNA interactions for Protein: Q99MQ5

Col25a1, Collagen alpha-1(XXV) chain, mousemouse

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col25a1Q99MQ5 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Col25a1Q99MQ5 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Col25a1Q99MQ5 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Col25a1Q99MQ5 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Col25a1Q99MQ5 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Col25a1Q99MQ5 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Col25a1Q99MQ5 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Col25a1Q99MQ5 Gm17518-201ENSMUST00000181232 1346 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Col25a1Q99MQ5 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Col25a1Q99MQ5 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Col25a1Q99MQ5 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Col25a1Q99MQ5 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Col25a1Q99MQ5 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Col25a1Q99MQ5 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Col25a1Q99MQ5 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Col25a1Q99MQ5 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Col25a1Q99MQ5 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Col25a1Q99MQ5 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Col25a1Q99MQ5 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
Col25a1Q99MQ5 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Col25a1Q99MQ5 Itpr3os-201ENSMUST00000143605 794 ntTSL 2 BASIC14.37□□□□□ -0.11
Col25a1Q99MQ5 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Col25a1Q99MQ5 Gm27682-201ENSMUST00000183930 110 ntBASIC14.37□□□□□ -0.11
Col25a1Q99MQ5 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Col25a1Q99MQ5 Gm45098-201ENSMUST00000207179 657 ntBASIC14.37□□□□□ -0.11
Col25a1Q99MQ5 AC164567.1-201ENSMUST00000219185 960 ntBASIC14.37□□□□□ -0.11
Col25a1Q99MQ5 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Col25a1Q99MQ5 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC14.37□□□□□ -0.11
Col25a1Q99MQ5 Gm8227-201ENSMUST00000223306 571 ntBASIC14.37□□□□□ -0.11
Col25a1Q99MQ5 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Col25a1Q99MQ5 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Col25a1Q99MQ5 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC14.37□□□□□ -0.11
Col25a1Q99MQ5 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Col25a1Q99MQ5 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Col25a1Q99MQ5 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Col25a1Q99MQ5 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Col25a1Q99MQ5 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Col25a1Q99MQ5 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Col25a1Q99MQ5 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Col25a1Q99MQ5 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Col25a1Q99MQ5 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Col25a1Q99MQ5 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Col25a1Q99MQ5 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Col25a1Q99MQ5 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Col25a1Q99MQ5 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Col25a1Q99MQ5 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Col25a1Q99MQ5 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Col25a1Q99MQ5 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Col25a1Q99MQ5 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Col25a1Q99MQ5 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Col25a1Q99MQ5 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Col25a1Q99MQ5 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Col25a1Q99MQ5 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Col25a1Q99MQ5 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Col25a1Q99MQ5 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Col25a1Q99MQ5 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC14.36□□□□□ -0.11
Col25a1Q99MQ5 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Col25a1Q99MQ5 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Col25a1Q99MQ5 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Col25a1Q99MQ5 Rpl15-204ENSMUST00000112598 802 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Col25a1Q99MQ5 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC14.36□□□□□ -0.11
Col25a1Q99MQ5 Gm11331-201ENSMUST00000119764 288 ntBASIC14.36□□□□□ -0.11
Col25a1Q99MQ5 Olfr647-ps1-201ENSMUST00000121599 960 ntBASIC14.36□□□□□ -0.11
Col25a1Q99MQ5 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Col25a1Q99MQ5 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC14.36□□□□□ -0.11
Col25a1Q99MQ5 1700081H04Rik-201ENSMUST00000190550 1128 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Col25a1Q99MQ5 Gm9124-201ENSMUST00000191789 1092 ntBASIC14.36□□□□□ -0.11
Col25a1Q99MQ5 Gm9113-201ENSMUST00000192510 1018 ntBASIC14.36□□□□□ -0.11
Col25a1Q99MQ5 Gm9131-201ENSMUST00000193557 1089 ntBASIC14.36□□□□□ -0.11
Col25a1Q99MQ5 Gm9121-201ENSMUST00000193749 1071 ntBASIC14.36□□□□□ -0.11
Col25a1Q99MQ5 Gm43378-201ENSMUST00000199336 582 ntBASIC14.36□□□□□ -0.11
Col25a1Q99MQ5 Gm45186-201ENSMUST00000206874 478 ntBASIC14.36□□□□□ -0.11
Col25a1Q99MQ5 Saa2-202ENSMUST00000210272 511 ntTSL 3 BASIC14.36□□□□□ -0.11
Col25a1Q99MQ5 Gm29705-201ENSMUST00000212598 474 ntBASIC14.36□□□□□ -0.11
Col25a1Q99MQ5 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Col25a1Q99MQ5 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Col25a1Q99MQ5 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Col25a1Q99MQ5 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
Col25a1Q99MQ5 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Col25a1Q99MQ5 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Col25a1Q99MQ5 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Col25a1Q99MQ5 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Col25a1Q99MQ5 Gm37305-201ENSMUST00000195714 4279 ntBASIC14.35□□□□□ -0.11
Col25a1Q99MQ5 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Col25a1Q99MQ5 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Col25a1Q99MQ5 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Col25a1Q99MQ5 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Col25a1Q99MQ5 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Col25a1Q99MQ5 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Col25a1Q99MQ5 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Col25a1Q99MQ5 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
Col25a1Q99MQ5 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Col25a1Q99MQ5 Avpr2-203ENSMUST00000114395 936 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Col25a1Q99MQ5 Gm15370-201ENSMUST00000117158 253 ntBASIC14.35□□□□□ -0.11
Col25a1Q99MQ5 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Col25a1Q99MQ5 Gm13786-201ENSMUST00000122371 333 ntBASIC14.35□□□□□ -0.11
Col25a1Q99MQ5 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC14.35□□□□□ -0.11
Col25a1Q99MQ5 Anp32a-205ENSMUST00000135395 924 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Col25a1Q99MQ5 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC14.35□□□□□ -0.11
Col25a1Q99MQ5 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms