Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Gm37230-201ENSMUST00000194491 818 ntBASIC12.21□□□□□ -0.45
Scrt1Q99M85 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC12.21□□□□□ -0.45
Scrt1Q99M85 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC12.21□□□□□ -0.45
Scrt1Q99M85 Gm7446-201ENSMUST00000221035 1240 ntBASIC12.21□□□□□ -0.45
Scrt1Q99M85 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Scrt1Q99M85 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Scrt1Q99M85 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Scrt1Q99M85 Olfr582-201ENSMUST00000098212 960 ntBASIC12.21□□□□□ -0.45
Scrt1Q99M85 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Scrt1Q99M85 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Scrt1Q99M85 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Scrt1Q99M85 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC12.21□□□□□ -0.46
Scrt1Q99M85 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Scrt1Q99M85 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC12.21□□□□□ -0.46
Scrt1Q99M85 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Scrt1Q99M85 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Scrt1Q99M85 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Scrt1Q99M85 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Scrt1Q99M85 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Scrt1Q99M85 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Scrt1Q99M85 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Scrt1Q99M85 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Scrt1Q99M85 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Scrt1Q99M85 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Scrt1Q99M85 Gm9200-201ENSMUST00000118513 1354 ntBASIC12.2□□□□□ -0.46
Scrt1Q99M85 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Scrt1Q99M85 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC12.2□□□□□ -0.46
Scrt1Q99M85 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Scrt1Q99M85 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Scrt1Q99M85 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Scrt1Q99M85 Carlr-201ENSMUST00000181515 2574 ntBASIC12.2□□□□□ -0.46
Scrt1Q99M85 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Scrt1Q99M85 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Scrt1Q99M85 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Scrt1Q99M85 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Scrt1Q99M85 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Scrt1Q99M85 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Scrt1Q99M85 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC12.2□□□□□ -0.46
Scrt1Q99M85 Gm33320-201ENSMUST00000192232 530 ntBASIC12.2□□□□□ -0.46
Scrt1Q99M85 Gm37933-201ENSMUST00000193964 981 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Scrt1Q99M85 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC12.2□□□□□ -0.46
Scrt1Q99M85 Gm42693-201ENSMUST00000196779 631 ntBASIC12.2□□□□□ -0.46
Scrt1Q99M85 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC12.2□□□□□ -0.46
Scrt1Q99M85 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Scrt1Q99M85 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Scrt1Q99M85 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Scrt1Q99M85 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Scrt1Q99M85 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Scrt1Q99M85 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Scrt1Q99M85 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC12.2□□□□□ -0.46
Scrt1Q99M85 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Scrt1Q99M85 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC12.2□□□□□ -0.46
Scrt1Q99M85 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Scrt1Q99M85 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Scrt1Q99M85 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Scrt1Q99M85 AC154527.2-201ENSMUST00000225256 1466 ntBASIC12.2□□□□□ -0.46
Scrt1Q99M85 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Scrt1Q99M85 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Scrt1Q99M85 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC12.2□□□□□ -0.46
Scrt1Q99M85 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Scrt1Q99M85 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Scrt1Q99M85 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Scrt1Q99M85 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Scrt1Q99M85 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
Scrt1Q99M85 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Scrt1Q99M85 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Scrt1Q99M85 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC12.19□□□□□ -0.46
Scrt1Q99M85 Ntrk2-208ENSMUST00000225583 2719 ntBASIC12.19□□□□□ -0.46
Scrt1Q99M85 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Scrt1Q99M85 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Scrt1Q99M85 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Scrt1Q99M85 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Scrt1Q99M85 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Scrt1Q99M85 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Scrt1Q99M85 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Scrt1Q99M85 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Scrt1Q99M85 Gm43195-201ENSMUST00000200614 2332 ntBASIC12.19□□□□□ -0.46
Scrt1Q99M85 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Scrt1Q99M85 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Scrt1Q99M85 Gm12585-201ENSMUST00000117307 290 ntBASIC12.19□□□□□ -0.46
Scrt1Q99M85 Gm15393-201ENSMUST00000120499 219 ntBASIC12.19□□□□□ -0.46
Scrt1Q99M85 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC12.19□□□□□ -0.46
Scrt1Q99M85 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Scrt1Q99M85 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Scrt1Q99M85 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC12.19□□□□□ -0.46
Scrt1Q99M85 Gm6244-201ENSMUST00000178732 841 ntBASIC12.19□□□□□ -0.46
Scrt1Q99M85 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC12.19□□□□□ -0.46
Scrt1Q99M85 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC12.19□□□□□ -0.46
Scrt1Q99M85 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC12.19□□□□□ -0.46
Scrt1Q99M85 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Scrt1Q99M85 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Scrt1Q99M85 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Scrt1Q99M85 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
Scrt1Q99M85 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC12.19□□□□□ -0.46
Scrt1Q99M85 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Scrt1Q99M85 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Scrt1Q99M85 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Scrt1Q99M85 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Scrt1Q99M85 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Scrt1Q99M85 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms