Protein–RNA interactions for Protein: Q99J95

Cdk9, Cyclin-dependent kinase 9, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk9Q99J95 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Cdk9Q99J95 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Cdk9Q99J95 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC14.03□□□□□ -0.16
Cdk9Q99J95 Gm5364-201ENSMUST00000216789 889 ntBASIC14.03□□□□□ -0.16
Cdk9Q99J95 AC102291.3-201ENSMUST00000226566 405 ntBASIC14.03□□□□□ -0.16
Cdk9Q99J95 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Cdk9Q99J95 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cdk9Q99J95 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Cdk9Q99J95 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cdk9Q99J95 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Cdk9Q99J95 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cdk9Q99J95 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cdk9Q99J95 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cdk9Q99J95 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC14.03□□□□□ -0.16
Cdk9Q99J95 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Cdk9Q99J95 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cdk9Q99J95 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cdk9Q99J95 Gm7899-201ENSMUST00000192935 1897 ntBASIC14.03□□□□□ -0.16
Cdk9Q99J95 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC14.03□□□□□ -0.16
Cdk9Q99J95 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC14.03□□□□□ -0.16
Cdk9Q99J95 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cdk9Q99J95 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Cdk9Q99J95 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Cdk9Q99J95 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cdk9Q99J95 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cdk9Q99J95 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Cdk9Q99J95 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Cdk9Q99J95 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cdk9Q99J95 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cdk9Q99J95 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cdk9Q99J95 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cdk9Q99J95 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cdk9Q99J95 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Cdk9Q99J95 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Cdk9Q99J95 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cdk9Q99J95 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Cdk9Q99J95 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cdk9Q99J95 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC14.02□□□□□ -0.16
Cdk9Q99J95 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC14.02□□□□□ -0.16
Cdk9Q99J95 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cdk9Q99J95 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cdk9Q99J95 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cdk9Q99J95 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Cdk9Q99J95 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cdk9Q99J95 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cdk9Q99J95 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC14.02□□□□□ -0.17
Cdk9Q99J95 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Cdk9Q99J95 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC14.02□□□□□ -0.17
Cdk9Q99J95 Gm27525-201ENSMUST00000184465 107 ntBASIC14.02□□□□□ -0.17
Cdk9Q99J95 Gm27628-201ENSMUST00000184911 107 ntBASIC14.02□□□□□ -0.17
Cdk9Q99J95 Psmb5-202ENSMUST00000227257 622 ntBASIC14.02□□□□□ -0.17
Cdk9Q99J95 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cdk9Q99J95 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cdk9Q99J95 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC14.02□□□□□ -0.17
Cdk9Q99J95 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.17
Cdk9Q99J95 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cdk9Q99J95 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Cdk9Q99J95 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cdk9Q99J95 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cdk9Q99J95 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cdk9Q99J95 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cdk9Q99J95 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cdk9Q99J95 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC14.02□□□□□ -0.17
Cdk9Q99J95 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cdk9Q99J95 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Cdk9Q99J95 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cdk9Q99J95 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cdk9Q99J95 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cdk9Q99J95 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cdk9Q99J95 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Cdk9Q99J95 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cdk9Q99J95 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cdk9Q99J95 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cdk9Q99J95 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cdk9Q99J95 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cdk9Q99J95 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cdk9Q99J95 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cdk9Q99J95 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Cdk9Q99J95 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cdk9Q99J95 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cdk9Q99J95 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC14.01□□□□□ -0.17
Cdk9Q99J95 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Cdk9Q99J95 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cdk9Q99J95 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC14.01□□□□□ -0.17
Cdk9Q99J95 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cdk9Q99J95 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cdk9Q99J95 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Cdk9Q99J95 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Cdk9Q99J95 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC14.01□□□□□ -0.17
Cdk9Q99J95 Gm16026-204ENSMUST00000162652 683 ntBASIC14.01□□□□□ -0.17
Cdk9Q99J95 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC14.01□□□□□ -0.17
Cdk9Q99J95 AC154222.1-201ENSMUST00000223882 475 ntBASIC14.01□□□□□ -0.17
Cdk9Q99J95 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cdk9Q99J95 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cdk9Q99J95 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cdk9Q99J95 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC14.01□□□□□ -0.17
Cdk9Q99J95 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cdk9Q99J95 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cdk9Q99J95 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Cdk9Q99J95 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 85.5 ms