Protein–RNA interactions for Protein: Q91XZ4

Pcdhb6, Protocadherin beta-6, mousemouse

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb6Q91XZ4 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdhb6Q91XZ4 Gm13385-201ENSMUST00000121089 220 ntBASIC14.28□□□□□ -0.12
Pcdhb6Q91XZ4 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Pcdhb6Q91XZ4 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdhb6Q91XZ4 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdhb6Q91XZ4 Mir6956-201ENSMUST00000183598 62 ntBASIC14.28□□□□□ -0.12
Pcdhb6Q91XZ4 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Pcdhb6Q91XZ4 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdhb6Q91XZ4 AC168058.1-201ENSMUST00000219521 2282 ntBASIC14.28□□□□□ -0.12
Pcdhb6Q91XZ4 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdhb6Q91XZ4 AC159621.2-201ENSMUST00000223519 1326 ntBASIC14.28□□□□□ -0.12
Pcdhb6Q91XZ4 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdhb6Q91XZ4 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdhb6Q91XZ4 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC14.28□□□□□ -0.12
Pcdhb6Q91XZ4 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdhb6Q91XZ4 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Pcdhb6Q91XZ4 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdhb6Q91XZ4 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC14.28□□□□□ -0.12
Pcdhb6Q91XZ4 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdhb6Q91XZ4 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
Pcdhb6Q91XZ4 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pcdhb6Q91XZ4 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Pcdhb6Q91XZ4 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pcdhb6Q91XZ4 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pcdhb6Q91XZ4 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pcdhb6Q91XZ4 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.12
Pcdhb6Q91XZ4 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Pcdhb6Q91XZ4 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pcdhb6Q91XZ4 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pcdhb6Q91XZ4 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pcdhb6Q91XZ4 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pcdhb6Q91XZ4 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pcdhb6Q91XZ4 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pcdhb6Q91XZ4 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pcdhb6Q91XZ4 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Pcdhb6Q91XZ4 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.12
Pcdhb6Q91XZ4 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC14.27□□□□□ -0.12
Pcdhb6Q91XZ4 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pcdhb6Q91XZ4 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdhb6Q91XZ4 Gm6912-201ENSMUST00000117218 544 ntBASIC14.27□□□□□ -0.13
Pcdhb6Q91XZ4 Gm4875-201ENSMUST00000118257 786 ntBASIC14.27□□□□□ -0.13
Pcdhb6Q91XZ4 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Pcdhb6Q91XZ4 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC14.27□□□□□ -0.13
Pcdhb6Q91XZ4 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdhb6Q91XZ4 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdhb6Q91XZ4 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdhb6Q91XZ4 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC14.27□□□□□ -0.13
Pcdhb6Q91XZ4 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC14.27□□□□□ -0.13
Pcdhb6Q91XZ4 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdhb6Q91XZ4 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdhb6Q91XZ4 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdhb6Q91XZ4 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdhb6Q91XZ4 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdhb6Q91XZ4 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdhb6Q91XZ4 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdhb6Q91XZ4 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC14.27□□□□□ -0.13
Pcdhb6Q91XZ4 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
Pcdhb6Q91XZ4 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdhb6Q91XZ4 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Pcdhb6Q91XZ4 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdhb6Q91XZ4 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Pcdhb6Q91XZ4 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC14.26□□□□□ -0.13
Pcdhb6Q91XZ4 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhb6Q91XZ4 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhb6Q91XZ4 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhb6Q91XZ4 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhb6Q91XZ4 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhb6Q91XZ4 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhb6Q91XZ4 Gm10729-202ENSMUST00000193403 1375 ntBASIC14.26□□□□□ -0.13
Pcdhb6Q91XZ4 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC14.26□□□□□ -0.13
Pcdhb6Q91XZ4 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhb6Q91XZ4 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC14.26□□□□□ -0.13
Pcdhb6Q91XZ4 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Pcdhb6Q91XZ4 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhb6Q91XZ4 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC14.26□□□□□ -0.13
Pcdhb6Q91XZ4 Gm5425-201ENSMUST00000214125 459 ntBASIC14.26□□□□□ -0.13
Pcdhb6Q91XZ4 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhb6Q91XZ4 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC14.26□□□□□ -0.13
Pcdhb6Q91XZ4 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhb6Q91XZ4 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhb6Q91XZ4 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhb6Q91XZ4 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhb6Q91XZ4 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhb6Q91XZ4 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Pcdhb6Q91XZ4 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC14.26□□□□□ -0.13
Pcdhb6Q91XZ4 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Pcdhb6Q91XZ4 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC14.26□□□□□ -0.13
Pcdhb6Q91XZ4 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhb6Q91XZ4 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Pcdhb6Q91XZ4 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhb6Q91XZ4 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhb6Q91XZ4 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhb6Q91XZ4 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Pcdhb6Q91XZ4 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhb6Q91XZ4 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhb6Q91XZ4 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Pcdhb6Q91XZ4 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdhb6Q91XZ4 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdhb6Q91XZ4 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdhb6Q91XZ4 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms