Protein–RNA interactions for Protein: Q8VC56

Rnf8, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 488 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf8Q8VC56 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Rnf8Q8VC56 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC13.45□□□□□ -0.26
Rnf8Q8VC56 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Rnf8Q8VC56 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC13.45□□□□□ -0.26
Rnf8Q8VC56 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Rnf8Q8VC56 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Rnf8Q8VC56 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Rnf8Q8VC56 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Rnf8Q8VC56 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Rnf8Q8VC56 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Rnf8Q8VC56 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Rnf8Q8VC56 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC13.45□□□□□ -0.26
Rnf8Q8VC56 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC13.45□□□□□ -0.26
Rnf8Q8VC56 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
Rnf8Q8VC56 Gm15920-201ENSMUST00000118998 402 ntBASIC13.45□□□□□ -0.26
Rnf8Q8VC56 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Rnf8Q8VC56 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC13.45□□□□□ -0.26
Rnf8Q8VC56 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC13.45□□□□□ -0.26
Rnf8Q8VC56 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Rnf8Q8VC56 Gm5479-201ENSMUST00000160578 435 ntBASIC13.45□□□□□ -0.26
Rnf8Q8VC56 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC13.45□□□□□ -0.26
Rnf8Q8VC56 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC13.45□□□□□ -0.26
Rnf8Q8VC56 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Rnf8Q8VC56 Gm10253-201ENSMUST00000194270 940 ntBASIC13.45□□□□□ -0.26
Rnf8Q8VC56 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC13.45□□□□□ -0.26
Rnf8Q8VC56 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Rnf8Q8VC56 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Rnf8Q8VC56 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Rnf8Q8VC56 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC13.45□□□□□ -0.26
Rnf8Q8VC56 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC13.45□□□□□ -0.26
Rnf8Q8VC56 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Rnf8Q8VC56 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Rnf8Q8VC56 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC13.45□□□□□ -0.26
Rnf8Q8VC56 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Rnf8Q8VC56 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Rnf8Q8VC56 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Rnf8Q8VC56 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Rnf8Q8VC56 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Rnf8Q8VC56 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Rnf8Q8VC56 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Rnf8Q8VC56 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Rnf8Q8VC56 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Rnf8Q8VC56 Gm37411-201ENSMUST00000194180 2282 ntBASIC13.44□□□□□ -0.26
Rnf8Q8VC56 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Rnf8Q8VC56 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Rnf8Q8VC56 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Rnf8Q8VC56 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Rnf8Q8VC56 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Rnf8Q8VC56 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Rnf8Q8VC56 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Rnf8Q8VC56 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Rnf8Q8VC56 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Rnf8Q8VC56 Gm6018-201ENSMUST00000216090 1306 ntBASIC13.44□□□□□ -0.26
Rnf8Q8VC56 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Rnf8Q8VC56 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC13.44□□□□□ -0.26
Rnf8Q8VC56 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC13.44□□□□□ -0.26
Rnf8Q8VC56 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Rnf8Q8VC56 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Rnf8Q8VC56 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Rnf8Q8VC56 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Rnf8Q8VC56 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Rnf8Q8VC56 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC13.44□□□□□ -0.26
Rnf8Q8VC56 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Rnf8Q8VC56 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC13.44□□□□□ -0.26
Rnf8Q8VC56 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC13.44□□□□□ -0.26
Rnf8Q8VC56 Gm24158-201ENSMUST00000175263 71 ntBASIC13.44□□□□□ -0.26
Rnf8Q8VC56 Gm9824-201ENSMUST00000178707 561 ntBASIC13.44□□□□□ -0.26
Rnf8Q8VC56 Gm43474-201ENSMUST00000196415 774 ntBASIC13.44□□□□□ -0.26
Rnf8Q8VC56 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC13.44□□□□□ -0.26
Rnf8Q8VC56 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC13.44□□□□□ -0.26
Rnf8Q8VC56 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Rnf8Q8VC56 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC13.44□□□□□ -0.26
Rnf8Q8VC56 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Rnf8Q8VC56 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Rnf8Q8VC56 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Rnf8Q8VC56 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Rnf8Q8VC56 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Rnf8Q8VC56 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Rnf8Q8VC56 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC13.44□□□□□ -0.26
Rnf8Q8VC56 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Rnf8Q8VC56 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Rnf8Q8VC56 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC13.44□□□□□ -0.26
Rnf8Q8VC56 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC13.43□□□□□ -0.26
Rnf8Q8VC56 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC13.43□□□□□ -0.26
Rnf8Q8VC56 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Rnf8Q8VC56 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Rnf8Q8VC56 Gm6756-201ENSMUST00000180647 1620 ntBASIC13.43□□□□□ -0.26
Rnf8Q8VC56 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Rnf8Q8VC56 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Rnf8Q8VC56 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Rnf8Q8VC56 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Rnf8Q8VC56 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Rnf8Q8VC56 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Rnf8Q8VC56 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Rnf8Q8VC56 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC13.43□□□□□ -0.26
Rnf8Q8VC56 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Rnf8Q8VC56 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC13.43□□□□□ -0.26
Rnf8Q8VC56 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Rnf8Q8VC56 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Rnf8Q8VC56 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms