Protein–RNA interactions for Protein: Q8R4E9

Cdt1, DNA replication factor Cdt1, mousemouse

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdt1Q8R4E9 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cdt1Q8R4E9 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Cdt1Q8R4E9 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Cdt1Q8R4E9 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
Cdt1Q8R4E9 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Cdt1Q8R4E9 Cd63-ps-201ENSMUST00000145417 875 ntBASIC13.51□□□□□ -0.25
Cdt1Q8R4E9 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Cdt1Q8R4E9 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Cdt1Q8R4E9 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cdt1Q8R4E9 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cdt1Q8R4E9 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC13.51□□□□□ -0.25
Cdt1Q8R4E9 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cdt1Q8R4E9 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cdt1Q8R4E9 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Cdt1Q8R4E9 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cdt1Q8R4E9 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cdt1Q8R4E9 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cdt1Q8R4E9 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cdt1Q8R4E9 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cdt1Q8R4E9 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Cdt1Q8R4E9 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Cdt1Q8R4E9 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cdt1Q8R4E9 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC13.51□□□□□ -0.25
Cdt1Q8R4E9 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Cdt1Q8R4E9 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cdt1Q8R4E9 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cdt1Q8R4E9 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Cdt1Q8R4E9 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cdt1Q8R4E9 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cdt1Q8R4E9 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cdt1Q8R4E9 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Cdt1Q8R4E9 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Cdt1Q8R4E9 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cdt1Q8R4E9 Gm9115-201ENSMUST00000120192 1348 ntBASIC13.5□□□□□ -0.25
Cdt1Q8R4E9 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Cdt1Q8R4E9 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Cdt1Q8R4E9 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cdt1Q8R4E9 Mir1897-201ENSMUST00000122581 272 ntBASIC13.5□□□□□ -0.25
Cdt1Q8R4E9 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Cdt1Q8R4E9 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Cdt1Q8R4E9 Mir7085-201ENSMUST00000184353 66 ntBASIC13.5□□□□□ -0.25
Cdt1Q8R4E9 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC13.5□□□□□ -0.25
Cdt1Q8R4E9 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cdt1Q8R4E9 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Cdt1Q8R4E9 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Cdt1Q8R4E9 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cdt1Q8R4E9 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cdt1Q8R4E9 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cdt1Q8R4E9 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Cdt1Q8R4E9 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cdt1Q8R4E9 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cdt1Q8R4E9 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Cdt1Q8R4E9 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cdt1Q8R4E9 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cdt1Q8R4E9 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cdt1Q8R4E9 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC13.49□□□□□ -0.25
Cdt1Q8R4E9 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Cdt1Q8R4E9 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cdt1Q8R4E9 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cdt1Q8R4E9 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Cdt1Q8R4E9 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cdt1Q8R4E9 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC13.49□□□□□ -0.25
Cdt1Q8R4E9 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Cdt1Q8R4E9 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cdt1Q8R4E9 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Cdt1Q8R4E9 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Cdt1Q8R4E9 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC13.49□□□□□ -0.25
Cdt1Q8R4E9 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC13.49□□□□□ -0.25
Cdt1Q8R4E9 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC13.49□□□□□ -0.25
Cdt1Q8R4E9 Gm44719-201ENSMUST00000206404 149 ntBASIC13.49□□□□□ -0.25
Cdt1Q8R4E9 Gm45453-201ENSMUST00000211758 853 ntBASIC13.49□□□□□ -0.25
Cdt1Q8R4E9 AC153962.4-201ENSMUST00000217878 242 ntBASIC13.49□□□□□ -0.25
Cdt1Q8R4E9 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC13.49□□□□□ -0.25
Cdt1Q8R4E9 Dupd1-202ENSMUST00000224735 548 ntBASIC13.49□□□□□ -0.25
Cdt1Q8R4E9 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cdt1Q8R4E9 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cdt1Q8R4E9 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Cdt1Q8R4E9 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cdt1Q8R4E9 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cdt1Q8R4E9 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cdt1Q8R4E9 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Cdt1Q8R4E9 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC13.49□□□□□ -0.25
Cdt1Q8R4E9 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Cdt1Q8R4E9 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cdt1Q8R4E9 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cdt1Q8R4E9 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cdt1Q8R4E9 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cdt1Q8R4E9 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Cdt1Q8R4E9 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cdt1Q8R4E9 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cdt1Q8R4E9 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cdt1Q8R4E9 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cdt1Q8R4E9 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cdt1Q8R4E9 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cdt1Q8R4E9 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC13.48□□□□□ -0.25
Cdt1Q8R4E9 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cdt1Q8R4E9 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cdt1Q8R4E9 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC13.48□□□□□ -0.25
Cdt1Q8R4E9 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cdt1Q8R4E9 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms