Protein–RNA interactions for Protein: Q8R0S1

Atf7, Cyclic AMP-dependent transcription factor ATF-7, mousemouse

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf7Q8R0S1 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Atf7Q8R0S1 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC16.42■□□□□ 0.22
Atf7Q8R0S1 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
Atf7Q8R0S1 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Atf7Q8R0S1 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Atf7Q8R0S1 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Atf7Q8R0S1 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Atf7Q8R0S1 Mir698-201ENSMUST00000102164 109 ntBASIC16.42■□□□□ 0.22
Atf7Q8R0S1 Gm12585-201ENSMUST00000117307 290 ntBASIC16.42■□□□□ 0.22
Atf7Q8R0S1 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC16.42■□□□□ 0.22
Atf7Q8R0S1 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Atf7Q8R0S1 Cd63-ps-201ENSMUST00000145417 875 ntBASIC16.42■□□□□ 0.22
Atf7Q8R0S1 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC16.42■□□□□ 0.22
Atf7Q8R0S1 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC16.42■□□□□ 0.22
Atf7Q8R0S1 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Atf7Q8R0S1 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Atf7Q8R0S1 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Atf7Q8R0S1 Gm8337-201ENSMUST00000187358 1938 ntBASIC16.42■□□□□ 0.22
Atf7Q8R0S1 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Atf7Q8R0S1 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Atf7Q8R0S1 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Atf7Q8R0S1 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC16.42■□□□□ 0.22
Atf7Q8R0S1 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Atf7Q8R0S1 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Atf7Q8R0S1 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Atf7Q8R0S1 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Atf7Q8R0S1 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Atf7Q8R0S1 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Atf7Q8R0S1 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Atf7Q8R0S1 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Atf7Q8R0S1 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Atf7Q8R0S1 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Atf7Q8R0S1 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Atf7Q8R0S1 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Atf7Q8R0S1 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Atf7Q8R0S1 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Atf7Q8R0S1 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Atf7Q8R0S1 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Atf7Q8R0S1 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Atf7Q8R0S1 Gm30238-201ENSMUST00000195528 2603 ntBASIC16.41■□□□□ 0.22
Atf7Q8R0S1 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Atf7Q8R0S1 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Atf7Q8R0S1 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Atf7Q8R0S1 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Atf7Q8R0S1 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Atf7Q8R0S1 Gm4804-201ENSMUST00000182234 999 ntBASIC16.41■□□□□ 0.22
Atf7Q8R0S1 Gm10766-202ENSMUST00000194123 606 ntBASIC16.41■□□□□ 0.22
Atf7Q8R0S1 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC16.41■□□□□ 0.22
Atf7Q8R0S1 Gm7775-201ENSMUST00000218871 853 ntBASIC16.41■□□□□ 0.22
Atf7Q8R0S1 AC166997.1-201ENSMUST00000225122 572 ntBASIC16.41■□□□□ 0.22
Atf7Q8R0S1 AC126408.1-201ENSMUST00000225184 523 ntBASIC16.41■□□□□ 0.22
Atf7Q8R0S1 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC16.41■□□□□ 0.22
Atf7Q8R0S1 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Atf7Q8R0S1 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Atf7Q8R0S1 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Atf7Q8R0S1 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Atf7Q8R0S1 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Atf7Q8R0S1 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Atf7Q8R0S1 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC16.41■□□□□ 0.22
Atf7Q8R0S1 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Atf7Q8R0S1 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Atf7Q8R0S1 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Atf7Q8R0S1 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Atf7Q8R0S1 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Atf7Q8R0S1 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Atf7Q8R0S1 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Atf7Q8R0S1 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Atf7Q8R0S1 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Atf7Q8R0S1 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Atf7Q8R0S1 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Atf7Q8R0S1 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Atf7Q8R0S1 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Atf7Q8R0S1 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Atf7Q8R0S1 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC16.4■□□□□ 0.22
Atf7Q8R0S1 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Atf7Q8R0S1 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC16.4■□□□□ 0.22
Atf7Q8R0S1 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Atf7Q8R0S1 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Atf7Q8R0S1 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Atf7Q8R0S1 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
Atf7Q8R0S1 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC16.4■□□□□ 0.22
Atf7Q8R0S1 Gm44719-201ENSMUST00000206404 149 ntBASIC16.4■□□□□ 0.22
Atf7Q8R0S1 Gm9063-201ENSMUST00000223299 582 ntBASIC16.4■□□□□ 0.22
Atf7Q8R0S1 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Atf7Q8R0S1 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC16.4■□□□□ 0.22
Atf7Q8R0S1 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC16.4■□□□□ 0.22
Atf7Q8R0S1 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Atf7Q8R0S1 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Atf7Q8R0S1 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Atf7Q8R0S1 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Atf7Q8R0S1 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Atf7Q8R0S1 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Atf7Q8R0S1 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Atf7Q8R0S1 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Atf7Q8R0S1 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Atf7Q8R0S1 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Atf7Q8R0S1 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Atf7Q8R0S1 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Atf7Q8R0S1 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC16.39■□□□□ 0.21
Atf7Q8R0S1 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms