Protein–RNA interactions for Protein: Q8CG50

Rab43, Ras-related protein Rab-43, mousemouse

Predictions only

Length 210 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab43Q8CG50 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Rab43Q8CG50 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Rab43Q8CG50 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rab43Q8CG50 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Rab43Q8CG50 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rab43Q8CG50 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rab43Q8CG50 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rab43Q8CG50 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Rab43Q8CG50 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rab43Q8CG50 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Rab43Q8CG50 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rab43Q8CG50 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rab43Q8CG50 Gm11814-201ENSMUST00000119515 929 ntBASIC13.55□□□□□ -0.24
Rab43Q8CG50 Gm15376-201ENSMUST00000122258 783 ntBASIC13.55□□□□□ -0.24
Rab43Q8CG50 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Rab43Q8CG50 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC13.55□□□□□ -0.24
Rab43Q8CG50 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rab43Q8CG50 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Rab43Q8CG50 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rab43Q8CG50 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rab43Q8CG50 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rab43Q8CG50 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rab43Q8CG50 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rab43Q8CG50 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rab43Q8CG50 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rab43Q8CG50 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rab43Q8CG50 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rab43Q8CG50 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rab43Q8CG50 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rab43Q8CG50 Gm4081-201ENSMUST00000195287 1838 ntBASIC13.55□□□□□ -0.24
Rab43Q8CG50 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rab43Q8CG50 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rab43Q8CG50 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Rab43Q8CG50 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rab43Q8CG50 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rab43Q8CG50 Gm45630-201ENSMUST00000210243 1911 ntBASIC13.54□□□□□ -0.24
Rab43Q8CG50 Gm45546-201ENSMUST00000211053 2394 ntBASIC13.54□□□□□ -0.24
Rab43Q8CG50 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Rab43Q8CG50 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rab43Q8CG50 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rab43Q8CG50 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rab43Q8CG50 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Rab43Q8CG50 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC13.54□□□□□ -0.24
Rab43Q8CG50 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC13.54□□□□□ -0.24
Rab43Q8CG50 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rab43Q8CG50 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Rab43Q8CG50 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Rab43Q8CG50 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rab43Q8CG50 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Rab43Q8CG50 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rab43Q8CG50 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Rab43Q8CG50 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rab43Q8CG50 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC13.54□□□□□ -0.24
Rab43Q8CG50 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rab43Q8CG50 Gm38230-201ENSMUST00000193572 1159 ntBASIC13.54□□□□□ -0.24
Rab43Q8CG50 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC13.54□□□□□ -0.24
Rab43Q8CG50 AC166997.1-201ENSMUST00000225122 572 ntBASIC13.54□□□□□ -0.24
Rab43Q8CG50 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rab43Q8CG50 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC13.54□□□□□ -0.24
Rab43Q8CG50 Gm8775-201ENSMUST00000170943 1327 ntBASIC13.54□□□□□ -0.24
Rab43Q8CG50 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rab43Q8CG50 Gm42471-201ENSMUST00000201457 1865 ntBASIC13.54□□□□□ -0.24
Rab43Q8CG50 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rab43Q8CG50 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rab43Q8CG50 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Rab43Q8CG50 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rab43Q8CG50 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rab43Q8CG50 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC13.54□□□□□ -0.24
Rab43Q8CG50 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Rab43Q8CG50 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rab43Q8CG50 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Rab43Q8CG50 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Rab43Q8CG50 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
Rab43Q8CG50 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC13.53□□□□□ -0.24
Rab43Q8CG50 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rab43Q8CG50 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rab43Q8CG50 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Rab43Q8CG50 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC13.53□□□□□ -0.24
Rab43Q8CG50 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rab43Q8CG50 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Rab43Q8CG50 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rab43Q8CG50 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Rab43Q8CG50 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Rab43Q8CG50 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rab43Q8CG50 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Rab43Q8CG50 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC13.53□□□□□ -0.24
Rab43Q8CG50 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Rab43Q8CG50 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rab43Q8CG50 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rab43Q8CG50 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rab43Q8CG50 Mir497b-201ENSMUST00000093601 125 ntBASIC13.53□□□□□ -0.24
Rab43Q8CG50 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rab43Q8CG50 Gm21038-201ENSMUST00000222205 1383 ntBASIC13.53□□□□□ -0.24
Rab43Q8CG50 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rab43Q8CG50 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC13.53□□□□□ -0.24
Rab43Q8CG50 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rab43Q8CG50 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rab43Q8CG50 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rab43Q8CG50 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rab43Q8CG50 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms