Protein–RNA interactions for Protein: Q8C120

Sh3rf3, SH3 domain-containing RING finger protein 3, mousemouse

Predictions only

Length 878 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf3Q8C120 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC14.52□□□□□ -0.09
Sh3rf3Q8C120 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Sh3rf3Q8C120 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Sh3rf3Q8C120 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC14.52□□□□□ -0.09
Sh3rf3Q8C120 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Sh3rf3Q8C120 Gm46209-201ENSMUST00000217912 553 ntBASIC14.52□□□□□ -0.09
Sh3rf3Q8C120 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Sh3rf3Q8C120 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Sh3rf3Q8C120 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Sh3rf3Q8C120 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Sh3rf3Q8C120 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Sh3rf3Q8C120 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Sh3rf3Q8C120 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Sh3rf3Q8C120 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Sh3rf3Q8C120 Gm42769-201ENSMUST00000198576 1659 ntBASIC14.52□□□□□ -0.09
Sh3rf3Q8C120 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Sh3rf3Q8C120 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Sh3rf3Q8C120 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
Sh3rf3Q8C120 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Sh3rf3Q8C120 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Sh3rf3Q8C120 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Sh3rf3Q8C120 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Sh3rf3Q8C120 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Sh3rf3Q8C120 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC14.51□□□□□ -0.09
Sh3rf3Q8C120 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Sh3rf3Q8C120 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Sh3rf3Q8C120 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC14.51□□□□□ -0.09
Sh3rf3Q8C120 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC14.51□□□□□ -0.09
Sh3rf3Q8C120 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Sh3rf3Q8C120 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC14.51□□□□□ -0.09
Sh3rf3Q8C120 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Sh3rf3Q8C120 Gm45779-201ENSMUST00000212189 4064 ntBASIC14.51□□□□□ -0.09
Sh3rf3Q8C120 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Sh3rf3Q8C120 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Sh3rf3Q8C120 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Sh3rf3Q8C120 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Sh3rf3Q8C120 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
Sh3rf3Q8C120 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Sh3rf3Q8C120 Gm17837-201ENSMUST00000186435 985 ntBASIC14.51□□□□□ -0.09
Sh3rf3Q8C120 Ighv1-25-201ENSMUST00000195638 345 ntBASIC14.51□□□□□ -0.09
Sh3rf3Q8C120 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
Sh3rf3Q8C120 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Sh3rf3Q8C120 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Sh3rf3Q8C120 CT030704.2-201ENSMUST00000228887 494 ntBASIC14.51□□□□□ -0.09
Sh3rf3Q8C120 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
Sh3rf3Q8C120 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Sh3rf3Q8C120 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Sh3rf3Q8C120 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Sh3rf3Q8C120 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Sh3rf3Q8C120 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Sh3rf3Q8C120 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Sh3rf3Q8C120 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Sh3rf3Q8C120 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Sh3rf3Q8C120 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Sh3rf3Q8C120 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Sh3rf3Q8C120 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Sh3rf3Q8C120 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Sh3rf3Q8C120 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC14.51□□□□□ -0.09
Sh3rf3Q8C120 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Sh3rf3Q8C120 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Sh3rf3Q8C120 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC14.5□□□□□ -0.09
Sh3rf3Q8C120 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Sh3rf3Q8C120 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Sh3rf3Q8C120 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC14.5□□□□□ -0.09
Sh3rf3Q8C120 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Sh3rf3Q8C120 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Sh3rf3Q8C120 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Sh3rf3Q8C120 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Sh3rf3Q8C120 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Sh3rf3Q8C120 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Sh3rf3Q8C120 Grk6-205ENSMUST00000224653 2976 ntBASIC14.5□□□□□ -0.09
Sh3rf3Q8C120 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Sh3rf3Q8C120 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Sh3rf3Q8C120 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Sh3rf3Q8C120 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Sh3rf3Q8C120 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Sh3rf3Q8C120 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Sh3rf3Q8C120 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Sh3rf3Q8C120 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC14.5□□□□□ -0.09
Sh3rf3Q8C120 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Sh3rf3Q8C120 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC14.5□□□□□ -0.09
Sh3rf3Q8C120 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC14.5□□□□□ -0.09
Sh3rf3Q8C120 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC14.5□□□□□ -0.09
Sh3rf3Q8C120 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Sh3rf3Q8C120 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Sh3rf3Q8C120 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Sh3rf3Q8C120 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Sh3rf3Q8C120 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Sh3rf3Q8C120 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Sh3rf3Q8C120 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Sh3rf3Q8C120 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Sh3rf3Q8C120 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Sh3rf3Q8C120 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Sh3rf3Q8C120 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Sh3rf3Q8C120 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Sh3rf3Q8C120 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Sh3rf3Q8C120 Gm15889-202ENSMUST00000212669 2443 ntBASIC14.5□□□□□ -0.09
Sh3rf3Q8C120 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Sh3rf3Q8C120 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Sh3rf3Q8C120 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC14.49□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms