Protein–RNA interactions for Protein: Q8BUP8

Fam43a, Protein FAM43A, mousemouse

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam43aQ8BUP8 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Fam43aQ8BUP8 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Fam43aQ8BUP8 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC15.61■□□□□ 0.09
Fam43aQ8BUP8 Gm42632-201ENSMUST00000201707 2411 ntBASIC15.6■□□□□ 0.09
Fam43aQ8BUP8 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Fam43aQ8BUP8 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Fam43aQ8BUP8 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Fam43aQ8BUP8 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Fam43aQ8BUP8 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Fam43aQ8BUP8 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Fam43aQ8BUP8 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Fam43aQ8BUP8 Gm15593-201ENSMUST00000122085 1008 ntBASIC15.6■□□□□ 0.09
Fam43aQ8BUP8 Gm17271-201ENSMUST00000165535 355 ntBASIC15.6■□□□□ 0.09
Fam43aQ8BUP8 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC15.6■□□□□ 0.09
Fam43aQ8BUP8 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Fam43aQ8BUP8 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Fam43aQ8BUP8 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Fam43aQ8BUP8 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC15.6■□□□□ 0.09
Fam43aQ8BUP8 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Fam43aQ8BUP8 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Fam43aQ8BUP8 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Fam43aQ8BUP8 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Fam43aQ8BUP8 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Fam43aQ8BUP8 Gm21009-201ENSMUST00000197169 1669 ntBASIC15.6■□□□□ 0.09
Fam43aQ8BUP8 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Fam43aQ8BUP8 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Fam43aQ8BUP8 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Fam43aQ8BUP8 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Fam43aQ8BUP8 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Fam43aQ8BUP8 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC15.59■□□□□ 0.09
Fam43aQ8BUP8 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Fam43aQ8BUP8 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Fam43aQ8BUP8 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Fam43aQ8BUP8 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Fam43aQ8BUP8 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Fam43aQ8BUP8 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
Fam43aQ8BUP8 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC15.59■□□□□ 0.09
Fam43aQ8BUP8 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Fam43aQ8BUP8 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Fam43aQ8BUP8 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Fam43aQ8BUP8 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Fam43aQ8BUP8 Olfr140-202ENSMUST00000111506 3449 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
Fam43aQ8BUP8 AC131743.5-201ENSMUST00000220775 1618 ntBASIC15.59■□□□□ 0.09
Fam43aQ8BUP8 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Fam43aQ8BUP8 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Fam43aQ8BUP8 Gm4913-201ENSMUST00000117075 1290 ntBASIC15.59■□□□□ 0.09
Fam43aQ8BUP8 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Fam43aQ8BUP8 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC15.59■□□□□ 0.09
Fam43aQ8BUP8 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC15.59■□□□□ 0.09
Fam43aQ8BUP8 Gm8597-201ENSMUST00000191525 1109 ntBASIC15.59■□□□□ 0.09
Fam43aQ8BUP8 Gm2272-201ENSMUST00000194903 582 ntBASIC15.59■□□□□ 0.09
Fam43aQ8BUP8 Gm20553-201ENSMUST00000204205 844 ntBASIC15.59■□□□□ 0.09
Fam43aQ8BUP8 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC15.59■□□□□ 0.09
Fam43aQ8BUP8 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC15.59■□□□□ 0.09
Fam43aQ8BUP8 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Fam43aQ8BUP8 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Fam43aQ8BUP8 Gm20554-201ENSMUST00000177421 2352 ntBASIC15.59■□□□□ 0.09
Fam43aQ8BUP8 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Fam43aQ8BUP8 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC15.59■□□□□ 0.09
Fam43aQ8BUP8 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Fam43aQ8BUP8 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Fam43aQ8BUP8 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Fam43aQ8BUP8 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
Fam43aQ8BUP8 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Fam43aQ8BUP8 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
Fam43aQ8BUP8 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC15.59■□□□□ 0.09
Fam43aQ8BUP8 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Fam43aQ8BUP8 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Fam43aQ8BUP8 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Fam43aQ8BUP8 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Fam43aQ8BUP8 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC15.59■□□□□ 0.09
Fam43aQ8BUP8 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.09
Fam43aQ8BUP8 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Fam43aQ8BUP8 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.09
Fam43aQ8BUP8 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Fam43aQ8BUP8 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC15.58■□□□□ 0.09
Fam43aQ8BUP8 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Fam43aQ8BUP8 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.09
Fam43aQ8BUP8 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.09
Fam43aQ8BUP8 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
Fam43aQ8BUP8 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC15.58■□□□□ 0.08
Fam43aQ8BUP8 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Fam43aQ8BUP8 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Fam43aQ8BUP8 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Fam43aQ8BUP8 Gm15427-201ENSMUST00000117288 531 ntBASIC15.58■□□□□ 0.08
Fam43aQ8BUP8 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC15.58■□□□□ 0.08
Fam43aQ8BUP8 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Fam43aQ8BUP8 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Fam43aQ8BUP8 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC15.58■□□□□ 0.08
Fam43aQ8BUP8 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC15.58■□□□□ 0.08
Fam43aQ8BUP8 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC15.58■□□□□ 0.08
Fam43aQ8BUP8 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC15.58■□□□□ 0.08
Fam43aQ8BUP8 CT025555.1-201ENSMUST00000225901 1217 ntBASIC15.58■□□□□ 0.08
Fam43aQ8BUP8 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Fam43aQ8BUP8 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Fam43aQ8BUP8 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Fam43aQ8BUP8 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
Fam43aQ8BUP8 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Fam43aQ8BUP8 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Fam43aQ8BUP8 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms