Protein–RNA interactions for Protein: Q8BQM7

Smco3, Single-pass membrane and coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco3Q8BQM7 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Smco3Q8BQM7 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Smco3Q8BQM7 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC11.47□□□□□ -0.57
Smco3Q8BQM7 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Smco3Q8BQM7 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Smco3Q8BQM7 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Smco3Q8BQM7 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Smco3Q8BQM7 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Smco3Q8BQM7 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Smco3Q8BQM7 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Smco3Q8BQM7 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Smco3Q8BQM7 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.57
Smco3Q8BQM7 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Smco3Q8BQM7 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Smco3Q8BQM7 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Smco3Q8BQM7 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Smco3Q8BQM7 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Smco3Q8BQM7 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Smco3Q8BQM7 Best4-ps-201ENSMUST00000129783 1380 ntBASIC11.46□□□□□ -0.57
Smco3Q8BQM7 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Smco3Q8BQM7 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Smco3Q8BQM7 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Smco3Q8BQM7 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Smco3Q8BQM7 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Smco3Q8BQM7 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC11.46□□□□□ -0.57
Smco3Q8BQM7 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC11.46□□□□□ -0.57
Smco3Q8BQM7 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Smco3Q8BQM7 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC11.46□□□□□ -0.57
Smco3Q8BQM7 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Smco3Q8BQM7 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Smco3Q8BQM7 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Smco3Q8BQM7 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Smco3Q8BQM7 AC159301.1-201ENSMUST00000225130 1182 ntBASIC11.46□□□□□ -0.57
Smco3Q8BQM7 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Smco3Q8BQM7 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Smco3Q8BQM7 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Smco3Q8BQM7 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC11.46□□□□□ -0.57
Smco3Q8BQM7 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Smco3Q8BQM7 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Smco3Q8BQM7 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.58
Smco3Q8BQM7 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Smco3Q8BQM7 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Smco3Q8BQM7 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.58
Smco3Q8BQM7 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Smco3Q8BQM7 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.58
Smco3Q8BQM7 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Smco3Q8BQM7 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Smco3Q8BQM7 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Smco3Q8BQM7 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Smco3Q8BQM7 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Smco3Q8BQM7 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Smco3Q8BQM7 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Smco3Q8BQM7 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Smco3Q8BQM7 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Smco3Q8BQM7 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Smco3Q8BQM7 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Smco3Q8BQM7 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Smco3Q8BQM7 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Smco3Q8BQM7 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Smco3Q8BQM7 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Smco3Q8BQM7 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Smco3Q8BQM7 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Smco3Q8BQM7 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Smco3Q8BQM7 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Smco3Q8BQM7 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Smco3Q8BQM7 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Smco3Q8BQM7 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Smco3Q8BQM7 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Smco3Q8BQM7 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Smco3Q8BQM7 Gm6944-201ENSMUST00000182449 1006 ntBASIC11.45□□□□□ -0.58
Smco3Q8BQM7 Gm8597-201ENSMUST00000191525 1109 ntBASIC11.45□□□□□ -0.58
Smco3Q8BQM7 Gm33142-201ENSMUST00000193913 867 ntBASIC11.45□□□□□ -0.58
Smco3Q8BQM7 Olfr286-202ENSMUST00000205305 969 ntBASIC11.45□□□□□ -0.58
Smco3Q8BQM7 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Smco3Q8BQM7 Gm9182-201ENSMUST00000217829 639 ntBASIC11.45□□□□□ -0.58
Smco3Q8BQM7 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Smco3Q8BQM7 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Smco3Q8BQM7 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Smco3Q8BQM7 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC11.45□□□□□ -0.58
Smco3Q8BQM7 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC11.45□□□□□ -0.58
Smco3Q8BQM7 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Smco3Q8BQM7 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC11.45□□□□□ -0.58
Smco3Q8BQM7 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC11.45□□□□□ -0.58
Smco3Q8BQM7 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Smco3Q8BQM7 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Smco3Q8BQM7 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Smco3Q8BQM7 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Smco3Q8BQM7 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Smco3Q8BQM7 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Smco3Q8BQM7 AC164565.1-201ENSMUST00000217520 1484 ntBASIC11.44□□□□□ -0.58
Smco3Q8BQM7 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Smco3Q8BQM7 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Smco3Q8BQM7 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Smco3Q8BQM7 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Smco3Q8BQM7 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Smco3Q8BQM7 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Smco3Q8BQM7 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Smco3Q8BQM7 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Smco3Q8BQM7 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Smco3Q8BQM7 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms