Protein–RNA interactions for Protein: Q80ZI1

Trnp1, TMF-regulated nuclear protein 1, mousemouse

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trnp1Q80ZI1 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trnp1Q80ZI1 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trnp1Q80ZI1 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Trnp1Q80ZI1 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Trnp1Q80ZI1 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
Trnp1Q80ZI1 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Trnp1Q80ZI1 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trnp1Q80ZI1 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trnp1Q80ZI1 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trnp1Q80ZI1 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC15.55■□□□□ 0.08
Trnp1Q80ZI1 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC15.55■□□□□ 0.08
Trnp1Q80ZI1 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trnp1Q80ZI1 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC15.55■□□□□ 0.08
Trnp1Q80ZI1 Gm12997-201ENSMUST00000120207 640 ntBASIC15.55■□□□□ 0.08
Trnp1Q80ZI1 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC15.55■□□□□ 0.08
Trnp1Q80ZI1 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC15.55■□□□□ 0.08
Trnp1Q80ZI1 Gm2383-201ENSMUST00000181461 807 ntBASIC15.55■□□□□ 0.08
Trnp1Q80ZI1 Gm6082-201ENSMUST00000215204 454 ntBASIC15.55■□□□□ 0.08
Trnp1Q80ZI1 AC132384.14-201ENSMUST00000219346 1147 ntBASIC15.55■□□□□ 0.08
Trnp1Q80ZI1 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trnp1Q80ZI1 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
Trnp1Q80ZI1 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trnp1Q80ZI1 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trnp1Q80ZI1 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC15.55■□□□□ 0.08
Trnp1Q80ZI1 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Trnp1Q80ZI1 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trnp1Q80ZI1 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trnp1Q80ZI1 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trnp1Q80ZI1 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trnp1Q80ZI1 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trnp1Q80ZI1 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trnp1Q80ZI1 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Trnp1Q80ZI1 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Trnp1Q80ZI1 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trnp1Q80ZI1 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trnp1Q80ZI1 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trnp1Q80ZI1 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trnp1Q80ZI1 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trnp1Q80ZI1 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trnp1Q80ZI1 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Trnp1Q80ZI1 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC15.54■□□□□ 0.08
Trnp1Q80ZI1 Gm6023-201ENSMUST00000118217 606 ntBASIC15.54■□□□□ 0.08
Trnp1Q80ZI1 Gm11658-201ENSMUST00000120913 1008 ntBASIC15.54■□□□□ 0.08
Trnp1Q80ZI1 Gm13123-201ENSMUST00000122173 492 ntBASIC15.54■□□□□ 0.08
Trnp1Q80ZI1 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC15.54■□□□□ 0.08
Trnp1Q80ZI1 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Trnp1Q80ZI1 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC15.54■□□□□ 0.08
Trnp1Q80ZI1 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC15.54■□□□□ 0.08
Trnp1Q80ZI1 Gm20482-202ENSMUST00000174729 825 ntBASIC15.54■□□□□ 0.08
Trnp1Q80ZI1 Gm2467-201ENSMUST00000182266 1010 ntBASIC15.54■□□□□ 0.08
Trnp1Q80ZI1 Gm6981-201ENSMUST00000182467 1008 ntBASIC15.54■□□□□ 0.08
Trnp1Q80ZI1 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC15.54■□□□□ 0.08
Trnp1Q80ZI1 Gm21769-201ENSMUST00000211922 111 ntBASIC15.54■□□□□ 0.08
Trnp1Q80ZI1 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC15.54■□□□□ 0.08
Trnp1Q80ZI1 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trnp1Q80ZI1 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trnp1Q80ZI1 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trnp1Q80ZI1 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Trnp1Q80ZI1 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trnp1Q80ZI1 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trnp1Q80ZI1 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trnp1Q80ZI1 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trnp1Q80ZI1 Gm16425-201ENSMUST00000118143 3130 ntBASIC15.54■□□□□ 0.08
Trnp1Q80ZI1 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trnp1Q80ZI1 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trnp1Q80ZI1 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Trnp1Q80ZI1 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Trnp1Q80ZI1 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trnp1Q80ZI1 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trnp1Q80ZI1 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trnp1Q80ZI1 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trnp1Q80ZI1 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Trnp1Q80ZI1 Gm13886-201ENSMUST00000117876 1183 ntBASIC15.53■□□□□ 0.08
Trnp1Q80ZI1 Gm4986-201ENSMUST00000119731 549 ntBASIC15.53■□□□□ 0.08
Trnp1Q80ZI1 Gm11591-201ENSMUST00000120063 702 ntBASIC15.53■□□□□ 0.08
Trnp1Q80ZI1 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC15.53■□□□□ 0.08
Trnp1Q80ZI1 Gm37489-201ENSMUST00000191883 159 ntBASIC15.53■□□□□ 0.08
Trnp1Q80ZI1 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Trnp1Q80ZI1 Gm44064-201ENSMUST00000204964 1087 ntBASIC15.53■□□□□ 0.08
Trnp1Q80ZI1 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trnp1Q80ZI1 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trnp1Q80ZI1 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Trnp1Q80ZI1 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC15.53■□□□□ 0.08
Trnp1Q80ZI1 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Trnp1Q80ZI1 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trnp1Q80ZI1 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Trnp1Q80ZI1 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trnp1Q80ZI1 Gm10040-201ENSMUST00000080726 1662 ntBASIC15.53■□□□□ 0.08
Trnp1Q80ZI1 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trnp1Q80ZI1 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Trnp1Q80ZI1 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Trnp1Q80ZI1 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trnp1Q80ZI1 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC15.53■□□□□ 0.08
Trnp1Q80ZI1 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trnp1Q80ZI1 Sybu-209ENSMUST00000228639 4113 ntBASIC15.53■□□□□ 0.08
Trnp1Q80ZI1 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trnp1Q80ZI1 AC113441.2-201ENSMUST00000221538 1468 ntBASIC15.52■□□□□ 0.08
Trnp1Q80ZI1 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC15.52■□□□□ 0.08
Trnp1Q80ZI1 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Trnp1Q80ZI1 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms