Protein–RNA interactions for Protein: Q80X41

Vrk1, Serine/threonine-protein kinase VRK1, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vrk1Q80X41 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Vrk1Q80X41 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC13.28□□□□□ -0.28
Vrk1Q80X41 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC13.28□□□□□ -0.28
Vrk1Q80X41 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Vrk1Q80X41 Gm44799-201ENSMUST00000207639 1202 ntBASIC13.28□□□□□ -0.28
Vrk1Q80X41 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Vrk1Q80X41 Gm17794-201ENSMUST00000220252 955 ntBASIC13.28□□□□□ -0.28
Vrk1Q80X41 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC13.28□□□□□ -0.28
Vrk1Q80X41 AC155729.1-201ENSMUST00000227758 544 ntBASIC13.28□□□□□ -0.28
Vrk1Q80X41 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Vrk1Q80X41 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Vrk1Q80X41 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Vrk1Q80X41 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Vrk1Q80X41 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Vrk1Q80X41 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC13.28□□□□□ -0.28
Vrk1Q80X41 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC13.28□□□□□ -0.28
Vrk1Q80X41 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Vrk1Q80X41 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Vrk1Q80X41 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Vrk1Q80X41 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Vrk1Q80X41 Gm14451-201ENSMUST00000121581 1542 ntBASIC13.28□□□□□ -0.28
Vrk1Q80X41 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC13.28□□□□□ -0.28
Vrk1Q80X41 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Vrk1Q80X41 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Vrk1Q80X41 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Vrk1Q80X41 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Vrk1Q80X41 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Vrk1Q80X41 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Vrk1Q80X41 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Vrk1Q80X41 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Vrk1Q80X41 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Vrk1Q80X41 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Vrk1Q80X41 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Vrk1Q80X41 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Vrk1Q80X41 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Vrk1Q80X41 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC13.27□□□□□ -0.28
Vrk1Q80X41 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Vrk1Q80X41 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
Vrk1Q80X41 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Vrk1Q80X41 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Vrk1Q80X41 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Vrk1Q80X41 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
Vrk1Q80X41 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Vrk1Q80X41 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Vrk1Q80X41 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Vrk1Q80X41 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC13.27□□□□□ -0.29
Vrk1Q80X41 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Vrk1Q80X41 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC13.27□□□□□ -0.29
Vrk1Q80X41 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC13.27□□□□□ -0.29
Vrk1Q80X41 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Vrk1Q80X41 AY702102-202ENSMUST00000194651 1173 ntBASIC13.27□□□□□ -0.29
Vrk1Q80X41 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC13.27□□□□□ -0.29
Vrk1Q80X41 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC13.27□□□□□ -0.29
Vrk1Q80X41 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC13.27□□□□□ -0.29
Vrk1Q80X41 Gm9899-201ENSMUST00000065519 555 ntBASIC13.27□□□□□ -0.29
Vrk1Q80X41 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Vrk1Q80X41 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Vrk1Q80X41 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Vrk1Q80X41 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Vrk1Q80X41 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Vrk1Q80X41 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Vrk1Q80X41 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Vrk1Q80X41 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Vrk1Q80X41 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Vrk1Q80X41 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Vrk1Q80X41 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Vrk1Q80X41 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Vrk1Q80X41 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC13.27□□□□□ -0.29
Vrk1Q80X41 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Vrk1Q80X41 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Vrk1Q80X41 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Vrk1Q80X41 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC13.26□□□□□ -0.29
Vrk1Q80X41 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Vrk1Q80X41 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Vrk1Q80X41 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Vrk1Q80X41 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Vrk1Q80X41 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Vrk1Q80X41 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Vrk1Q80X41 Gm5303-201ENSMUST00000117943 1252 ntBASIC13.26□□□□□ -0.29
Vrk1Q80X41 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC13.26□□□□□ -0.29
Vrk1Q80X41 Gm9109-201ENSMUST00000120254 1405 ntBASIC13.26□□□□□ -0.29
Vrk1Q80X41 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC13.26□□□□□ -0.29
Vrk1Q80X41 Mir1894-201ENSMUST00000122802 81 ntBASIC13.26□□□□□ -0.29
Vrk1Q80X41 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
Vrk1Q80X41 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Vrk1Q80X41 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Vrk1Q80X41 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Vrk1Q80X41 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC13.26□□□□□ -0.29
Vrk1Q80X41 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Vrk1Q80X41 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Vrk1Q80X41 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Vrk1Q80X41 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC13.26□□□□□ -0.29
Vrk1Q80X41 AC114008.2-201ENSMUST00000227699 1347 ntBASIC13.26□□□□□ -0.29
Vrk1Q80X41 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Vrk1Q80X41 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Vrk1Q80X41 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Vrk1Q80X41 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Vrk1Q80X41 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Vrk1Q80X41 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC13.26□□□□□ -0.29
Vrk1Q80X41 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms