Protein–RNA interactions for Protein: Q80W14

Prpf40b, Pre-mRNA-processing factor 40 homolog B, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40bQ80W14 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Prpf40bQ80W14 Gm15393-201ENSMUST00000120499 219 ntBASIC16.05■□□□□ 0.16
Prpf40bQ80W14 Gm7558-201ENSMUST00000193221 1165 ntBASIC16.05■□□□□ 0.16
Prpf40bQ80W14 AA619741-201ENSMUST00000195095 646 ntBASIC16.05■□□□□ 0.16
Prpf40bQ80W14 Gm9728-201ENSMUST00000200197 1055 ntBASIC16.05■□□□□ 0.16
Prpf40bQ80W14 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC16.05■□□□□ 0.16
Prpf40bQ80W14 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Prpf40bQ80W14 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Prpf40bQ80W14 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Prpf40bQ80W14 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Prpf40bQ80W14 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC16.05■□□□□ 0.16
Prpf40bQ80W14 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Prpf40bQ80W14 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Prpf40bQ80W14 Gm44291-201ENSMUST00000203102 2865 ntBASIC16.05■□□□□ 0.16
Prpf40bQ80W14 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Prpf40bQ80W14 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Prpf40bQ80W14 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Prpf40bQ80W14 AC154527.2-201ENSMUST00000225256 1466 ntBASIC16.04■□□□□ 0.16
Prpf40bQ80W14 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Prpf40bQ80W14 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Prpf40bQ80W14 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC16.04■□□□□ 0.16
Prpf40bQ80W14 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Prpf40bQ80W14 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Prpf40bQ80W14 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Prpf40bQ80W14 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Prpf40bQ80W14 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Prpf40bQ80W14 Gm18827-201ENSMUST00000188341 790 ntBASIC16.04■□□□□ 0.16
Prpf40bQ80W14 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC16.04■□□□□ 0.16
Prpf40bQ80W14 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Prpf40bQ80W14 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC16.04■□□□□ 0.16
Prpf40bQ80W14 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Prpf40bQ80W14 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Prpf40bQ80W14 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Prpf40bQ80W14 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Prpf40bQ80W14 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Prpf40bQ80W14 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Prpf40bQ80W14 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Prpf40bQ80W14 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC16.04■□□□□ 0.16
Prpf40bQ80W14 Gm45751-201ENSMUST00000210185 1573 ntBASIC16.04■□□□□ 0.16
Prpf40bQ80W14 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Prpf40bQ80W14 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Prpf40bQ80W14 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Prpf40bQ80W14 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Prpf40bQ80W14 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Prpf40bQ80W14 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Prpf40bQ80W14 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Prpf40bQ80W14 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Prpf40bQ80W14 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Prpf40bQ80W14 Gm43399-201ENSMUST00000202546 2374 ntBASIC16.03■□□□□ 0.16
Prpf40bQ80W14 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Prpf40bQ80W14 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Prpf40bQ80W14 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC16.03■□□□□ 0.16
Prpf40bQ80W14 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC16.03■□□□□ 0.16
Prpf40bQ80W14 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC16.03■□□□□ 0.16
Prpf40bQ80W14 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Prpf40bQ80W14 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC16.03■□□□□ 0.16
Prpf40bQ80W14 Gm38230-201ENSMUST00000193572 1159 ntBASIC16.03■□□□□ 0.16
Prpf40bQ80W14 Gm18307-201ENSMUST00000206864 949 ntBASIC16.03■□□□□ 0.16
Prpf40bQ80W14 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Prpf40bQ80W14 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Prpf40bQ80W14 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Prpf40bQ80W14 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Prpf40bQ80W14 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Prpf40bQ80W14 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Prpf40bQ80W14 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Prpf40bQ80W14 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Prpf40bQ80W14 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Prpf40bQ80W14 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC16.03■□□□□ 0.16
Prpf40bQ80W14 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Prpf40bQ80W14 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Prpf40bQ80W14 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Prpf40bQ80W14 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Prpf40bQ80W14 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Prpf40bQ80W14 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
Prpf40bQ80W14 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Prpf40bQ80W14 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Prpf40bQ80W14 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Prpf40bQ80W14 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Prpf40bQ80W14 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Prpf40bQ80W14 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
Prpf40bQ80W14 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Prpf40bQ80W14 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Prpf40bQ80W14 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Prpf40bQ80W14 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC16.02■□□□□ 0.16
Prpf40bQ80W14 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC16.02■□□□□ 0.16
Prpf40bQ80W14 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Prpf40bQ80W14 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
Prpf40bQ80W14 Gm12329-201ENSMUST00000120829 1007 ntBASIC16.02■□□□□ 0.16
Prpf40bQ80W14 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC16.02■□□□□ 0.16
Prpf40bQ80W14 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Prpf40bQ80W14 Gm33320-201ENSMUST00000192232 530 ntBASIC16.02■□□□□ 0.16
Prpf40bQ80W14 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC16.02■□□□□ 0.16
Prpf40bQ80W14 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Prpf40bQ80W14 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC16.02■□□□□ 0.16
Prpf40bQ80W14 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Prpf40bQ80W14 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Prpf40bQ80W14 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Prpf40bQ80W14 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC16.02■□□□□ 0.15
Prpf40bQ80W14 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
Prpf40bQ80W14 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 52.5 ms