Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Prpf38bQ80SY5 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Prpf38bQ80SY5 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Prpf38bQ80SY5 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Prpf38bQ80SY5 Mir1894-201ENSMUST00000122802 81 ntBASIC14.58□□□□□ -0.08
Prpf38bQ80SY5 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC14.58□□□□□ -0.08
Prpf38bQ80SY5 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC14.58□□□□□ -0.08
Prpf38bQ80SY5 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Prpf38bQ80SY5 AC155252.1-201ENSMUST00000226462 1208 ntBASIC14.58□□□□□ -0.08
Prpf38bQ80SY5 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Prpf38bQ80SY5 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Prpf38bQ80SY5 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Prpf38bQ80SY5 Gm42471-201ENSMUST00000201457 1865 ntBASIC14.58□□□□□ -0.08
Prpf38bQ80SY5 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Prpf38bQ80SY5 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC14.58□□□□□ -0.08
Prpf38bQ80SY5 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Prpf38bQ80SY5 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Prpf38bQ80SY5 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC14.58□□□□□ -0.08
Prpf38bQ80SY5 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Prpf38bQ80SY5 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Prpf38bQ80SY5 Gm30238-201ENSMUST00000195528 2603 ntBASIC14.58□□□□□ -0.08
Prpf38bQ80SY5 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Prpf38bQ80SY5 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Prpf38bQ80SY5 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Prpf38bQ80SY5 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Prpf38bQ80SY5 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC14.57□□□□□ -0.08
Prpf38bQ80SY5 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Prpf38bQ80SY5 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC14.57□□□□□ -0.08
Prpf38bQ80SY5 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Prpf38bQ80SY5 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Prpf38bQ80SY5 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC14.57□□□□□ -0.08
Prpf38bQ80SY5 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Prpf38bQ80SY5 Mup-ps23-201ENSMUST00000118063 630 ntBASIC14.57□□□□□ -0.08
Prpf38bQ80SY5 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC14.57□□□□□ -0.08
Prpf38bQ80SY5 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Prpf38bQ80SY5 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Prpf38bQ80SY5 Gm5354-201ENSMUST00000182417 973 ntBASIC14.57□□□□□ -0.08
Prpf38bQ80SY5 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Prpf38bQ80SY5 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC14.57□□□□□ -0.08
Prpf38bQ80SY5 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Prpf38bQ80SY5 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Prpf38bQ80SY5 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Prpf38bQ80SY5 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Prpf38bQ80SY5 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Prpf38bQ80SY5 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Prpf38bQ80SY5 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC14.57□□□□□ -0.08
Prpf38bQ80SY5 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Prpf38bQ80SY5 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Prpf38bQ80SY5 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Prpf38bQ80SY5 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Prpf38bQ80SY5 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC14.57□□□□□ -0.08
Prpf38bQ80SY5 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Prpf38bQ80SY5 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Prpf38bQ80SY5 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Prpf38bQ80SY5 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Prpf38bQ80SY5 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC14.57□□□□□ -0.08
Prpf38bQ80SY5 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Prpf38bQ80SY5 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Prpf38bQ80SY5 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Prpf38bQ80SY5 Gm14780-201ENSMUST00000118387 2737 ntBASIC14.57□□□□□ -0.08
Prpf38bQ80SY5 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Prpf38bQ80SY5 AC153366.2-201ENSMUST00000219461 1984 ntBASIC14.56□□□□□ -0.08
Prpf38bQ80SY5 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Prpf38bQ80SY5 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Prpf38bQ80SY5 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Prpf38bQ80SY5 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Prpf38bQ80SY5 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Prpf38bQ80SY5 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC14.56□□□□□ -0.08
Prpf38bQ80SY5 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC14.56□□□□□ -0.08
Prpf38bQ80SY5 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Prpf38bQ80SY5 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Prpf38bQ80SY5 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Prpf38bQ80SY5 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Prpf38bQ80SY5 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Prpf38bQ80SY5 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Prpf38bQ80SY5 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Prpf38bQ80SY5 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
Prpf38bQ80SY5 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Prpf38bQ80SY5 Gm7820-201ENSMUST00000121012 1052 ntBASIC14.56□□□□□ -0.08
Prpf38bQ80SY5 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC14.56□□□□□ -0.08
Prpf38bQ80SY5 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Prpf38bQ80SY5 Rn7s1-201ENSMUST00000174924 300 ntBASIC14.56□□□□□ -0.08
Prpf38bQ80SY5 Rn7s2-201ENSMUST00000175032 300 ntBASIC14.56□□□□□ -0.08
Prpf38bQ80SY5 Gm26461-201ENSMUST00000175064 290 ntBASIC14.56□□□□□ -0.08
Prpf38bQ80SY5 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC14.56□□□□□ -0.08
Prpf38bQ80SY5 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC14.56□□□□□ -0.08
Prpf38bQ80SY5 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC14.56□□□□□ -0.08
Prpf38bQ80SY5 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Prpf38bQ80SY5 AC153961.1-201ENSMUST00000217760 385 ntBASIC14.56□□□□□ -0.08
Prpf38bQ80SY5 AC156016.3-201ENSMUST00000228623 344 ntBASIC14.56□□□□□ -0.08
Prpf38bQ80SY5 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Prpf38bQ80SY5 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Prpf38bQ80SY5 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Prpf38bQ80SY5 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Prpf38bQ80SY5 Gm38058-201ENSMUST00000194323 4368 ntBASIC14.56□□□□□ -0.08
Prpf38bQ80SY5 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Prpf38bQ80SY5 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Prpf38bQ80SY5 Gm18222-201ENSMUST00000202416 1387 ntBASIC14.56□□□□□ -0.08
Prpf38bQ80SY5 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Prpf38bQ80SY5 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 61.7 ms