Protein–RNA interactions for Protein: Q78T54

Vma21, Vacuolar ATPase assembly integral membrane protein Vma21, mousemouse

Predictions only

Length 101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vma21Q78T54 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC11.32□□□□□ -0.6
Vma21Q78T54 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC11.32□□□□□ -0.6
Vma21Q78T54 AC090659.1-201ENSMUST00000224334 768 ntBASIC11.32□□□□□ -0.6
Vma21Q78T54 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Vma21Q78T54 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC11.32□□□□□ -0.6
Vma21Q78T54 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Vma21Q78T54 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Vma21Q78T54 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Vma21Q78T54 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Vma21Q78T54 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Vma21Q78T54 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Vma21Q78T54 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Vma21Q78T54 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Vma21Q78T54 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Vma21Q78T54 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Vma21Q78T54 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Vma21Q78T54 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Vma21Q78T54 Gm2420-202ENSMUST00000202224 2249 ntBASIC11.32□□□□□ -0.6
Vma21Q78T54 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Vma21Q78T54 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Vma21Q78T54 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Vma21Q78T54 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Vma21Q78T54 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Vma21Q78T54 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Vma21Q78T54 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Vma21Q78T54 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Vma21Q78T54 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC11.31□□□□□ -0.6
Vma21Q78T54 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC11.31□□□□□ -0.6
Vma21Q78T54 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Vma21Q78T54 Ntrk2-209ENSMUST00000225950 2640 ntBASIC11.31□□□□□ -0.6
Vma21Q78T54 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Vma21Q78T54 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Vma21Q78T54 Gm37844-201ENSMUST00000192473 4097 ntBASIC11.31□□□□□ -0.6
Vma21Q78T54 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Vma21Q78T54 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Vma21Q78T54 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Vma21Q78T54 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Vma21Q78T54 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Vma21Q78T54 Gm2810-201ENSMUST00000118681 990 ntBASIC11.31□□□□□ -0.6
Vma21Q78T54 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC11.31□□□□□ -0.6
Vma21Q78T54 AA543401-201ENSMUST00000164248 1269 ntBASIC11.31□□□□□ -0.6
Vma21Q78T54 Gm38225-201ENSMUST00000194001 393 ntBASIC11.31□□□□□ -0.6
Vma21Q78T54 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Vma21Q78T54 Gm18057-201ENSMUST00000208220 503 ntBASIC11.31□□□□□ -0.6
Vma21Q78T54 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC11.31□□□□□ -0.6
Vma21Q78T54 AC166341.4-201ENSMUST00000220625 123 ntBASIC11.31□□□□□ -0.6
Vma21Q78T54 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Vma21Q78T54 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
Vma21Q78T54 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Vma21Q78T54 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Vma21Q78T54 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Vma21Q78T54 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC11.31□□□□□ -0.6
Vma21Q78T54 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Vma21Q78T54 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Vma21Q78T54 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Vma21Q78T54 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Vma21Q78T54 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Vma21Q78T54 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Vma21Q78T54 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Vma21Q78T54 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Vma21Q78T54 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Vma21Q78T54 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Vma21Q78T54 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC11.3□□□□□ -0.6
Vma21Q78T54 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Vma21Q78T54 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Vma21Q78T54 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Vma21Q78T54 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Vma21Q78T54 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Vma21Q78T54 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Vma21Q78T54 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Vma21Q78T54 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Vma21Q78T54 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Vma21Q78T54 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Vma21Q78T54 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC11.3□□□□□ -0.6
Vma21Q78T54 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC11.3□□□□□ -0.6
Vma21Q78T54 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC11.3□□□□□ -0.6
Vma21Q78T54 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Vma21Q78T54 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC11.3□□□□□ -0.6
Vma21Q78T54 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC11.3□□□□□ -0.6
Vma21Q78T54 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC11.3□□□□□ -0.6
Vma21Q78T54 Ighv8-14-201ENSMUST00000196781 358 ntBASIC11.3□□□□□ -0.6
Vma21Q78T54 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Vma21Q78T54 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC11.3□□□□□ -0.6
Vma21Q78T54 Gm5712-201ENSMUST00000199748 1043 ntBASIC11.3□□□□□ -0.6
Vma21Q78T54 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC11.3□□□□□ -0.6
Vma21Q78T54 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC11.3□□□□□ -0.6
Vma21Q78T54 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC11.3□□□□□ -0.6
Vma21Q78T54 Bloc1s5-203ENSMUST00000224902 612 ntBASIC11.3□□□□□ -0.6
Vma21Q78T54 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Vma21Q78T54 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Vma21Q78T54 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Vma21Q78T54 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Vma21Q78T54 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Vma21Q78T54 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Vma21Q78T54 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Vma21Q78T54 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Vma21Q78T54 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Vma21Q78T54 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Vma21Q78T54 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC11.3□□□□□ -0.6
Vma21Q78T54 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms