Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Rif1Q6PR54 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Rif1Q6PR54 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Rif1Q6PR54 Gm3283-201ENSMUST00000199319 1350 ntBASIC11.7□□□□□ -0.54
Rif1Q6PR54 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Rif1Q6PR54 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC11.69□□□□□ -0.54
Rif1Q6PR54 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Rif1Q6PR54 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC11.69□□□□□ -0.54
Rif1Q6PR54 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC11.69□□□□□ -0.54
Rif1Q6PR54 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Rif1Q6PR54 Gm6222-202ENSMUST00000182143 629 ntBASIC11.69□□□□□ -0.54
Rif1Q6PR54 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC11.69□□□□□ -0.54
Rif1Q6PR54 Timm9-201ENSMUST00000021486 794 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Rif1Q6PR54 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC11.69□□□□□ -0.54
Rif1Q6PR54 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Rif1Q6PR54 Ly6g5c-201ENSMUST00000037849 509 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Rif1Q6PR54 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Rif1Q6PR54 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC11.69□□□□□ -0.54
Rif1Q6PR54 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC11.69□□□□□ -0.54
Rif1Q6PR54 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Rif1Q6PR54 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Rif1Q6PR54 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Rif1Q6PR54 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Rif1Q6PR54 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Rif1Q6PR54 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Rif1Q6PR54 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Rif1Q6PR54 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Rif1Q6PR54 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Rif1Q6PR54 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Rif1Q6PR54 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Rif1Q6PR54 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Rif1Q6PR54 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Rif1Q6PR54 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Rif1Q6PR54 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Rif1Q6PR54 Rfc4-202ENSMUST00000115337 416 ntTSL 5 BASIC11.69□□□□□ -0.54
Rif1Q6PR54 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC11.69□□□□□ -0.54
Rif1Q6PR54 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Rif1Q6PR54 Gm13611-201ENSMUST00000118269 318 ntBASIC11.69□□□□□ -0.54
Rif1Q6PR54 Gm14460-201ENSMUST00000121511 639 ntBASIC11.69□□□□□ -0.54
Rif1Q6PR54 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC11.69□□□□□ -0.54
Rif1Q6PR54 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Rif1Q6PR54 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Rif1Q6PR54 Gm9678-201ENSMUST00000198979 1149 ntBASIC11.69□□□□□ -0.54
Rif1Q6PR54 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC11.69□□□□□ -0.54
Rif1Q6PR54 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.54
Rif1Q6PR54 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Rif1Q6PR54 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Rif1Q6PR54 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Rif1Q6PR54 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Rif1Q6PR54 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Rif1Q6PR54 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Rif1Q6PR54 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Rif1Q6PR54 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Rif1Q6PR54 Gm37305-201ENSMUST00000195714 4279 ntBASIC11.68□□□□□ -0.54
Rif1Q6PR54 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Rif1Q6PR54 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Rif1Q6PR54 Snrpa-206ENSMUST00000163311 1288 ntAPPRIS P1 TSL 2 BASIC11.68□□□□□ -0.54
Rif1Q6PR54 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC11.68□□□□□ -0.54
Rif1Q6PR54 Cbx3-ps8-201ENSMUST00000214564 548 ntBASIC11.68□□□□□ -0.54
Rif1Q6PR54 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Rif1Q6PR54 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Rif1Q6PR54 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Rif1Q6PR54 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Rif1Q6PR54 Gm42941-201ENSMUST00000200347 1321 ntBASIC11.68□□□□□ -0.54
Rif1Q6PR54 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Rif1Q6PR54 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Rif1Q6PR54 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Rif1Q6PR54 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Rif1Q6PR54 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Rif1Q6PR54 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Rif1Q6PR54 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC11.68□□□□□ -0.54
Rif1Q6PR54 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Rif1Q6PR54 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Rif1Q6PR54 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Rif1Q6PR54 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC11.68□□□□□ -0.54
Rif1Q6PR54 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Rif1Q6PR54 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Rif1Q6PR54 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Rif1Q6PR54 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC11.68□□□□□ -0.54
Rif1Q6PR54 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Rif1Q6PR54 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Rif1Q6PR54 Gm26464-201ENSMUST00000157094 305 ntBASIC11.68□□□□□ -0.54
Rif1Q6PR54 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Rif1Q6PR54 Rn7s6-201ENSMUST00000175005 291 ntBASIC11.68□□□□□ -0.54
Rif1Q6PR54 Gm6771-201ENSMUST00000182716 1001 ntBASIC11.68□□□□□ -0.54
Rif1Q6PR54 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Rif1Q6PR54 Arhgef33-210ENSMUST00000225548 456 ntBASIC11.68□□□□□ -0.54
Rif1Q6PR54 Pf4-201ENSMUST00000031320 588 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Rif1Q6PR54 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Rif1Q6PR54 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Rif1Q6PR54 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Rif1Q6PR54 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Rif1Q6PR54 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Rif1Q6PR54 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Rif1Q6PR54 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC11.68□□□□□ -0.54
Rif1Q6PR54 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Rif1Q6PR54 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Rif1Q6PR54 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Rif1Q6PR54 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Rif1Q6PR54 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms