Protein–RNA interactions for Protein: Q6PDQ2

Chd4, Chromodomain-helicase-DNA-binding protein 4, mousemouse

Known RBP Predictions only

Length 1,915 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd4Q6PDQ2 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC17.84■□□□□ 0.45
Chd4Q6PDQ2 Gm3961-201ENSMUST00000204425 994 ntBASIC17.84■□□□□ 0.45
Chd4Q6PDQ2 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
Chd4Q6PDQ2 Gm45880-201ENSMUST00000213041 853 ntBASIC17.84■□□□□ 0.45
Chd4Q6PDQ2 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Chd4Q6PDQ2 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Chd4Q6PDQ2 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Chd4Q6PDQ2 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Chd4Q6PDQ2 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Chd4Q6PDQ2 Gm3756-201ENSMUST00000169182 1355 ntBASIC17.84■□□□□ 0.45
Chd4Q6PDQ2 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC17.84■□□□□ 0.45
Chd4Q6PDQ2 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Chd4Q6PDQ2 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC17.84■□□□□ 0.45
Chd4Q6PDQ2 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Chd4Q6PDQ2 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
Chd4Q6PDQ2 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Chd4Q6PDQ2 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Chd4Q6PDQ2 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
Chd4Q6PDQ2 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Chd4Q6PDQ2 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Chd4Q6PDQ2 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Chd4Q6PDQ2 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Chd4Q6PDQ2 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Chd4Q6PDQ2 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Chd4Q6PDQ2 Gm3890-201ENSMUST00000182416 207 ntBASIC17.83■□□□□ 0.44
Chd4Q6PDQ2 Gm6334-201ENSMUST00000207083 228 ntBASIC17.83■□□□□ 0.44
Chd4Q6PDQ2 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC17.83■□□□□ 0.44
Chd4Q6PDQ2 AC159747.1-201ENSMUST00000219903 265 ntBASIC17.83■□□□□ 0.44
Chd4Q6PDQ2 CT485787.1-201ENSMUST00000225617 968 ntBASIC17.83■□□□□ 0.44
Chd4Q6PDQ2 Gm10268-201ENSMUST00000085340 555 ntBASIC17.83■□□□□ 0.44
Chd4Q6PDQ2 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Chd4Q6PDQ2 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Chd4Q6PDQ2 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Chd4Q6PDQ2 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Chd4Q6PDQ2 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC17.83■□□□□ 0.44
Chd4Q6PDQ2 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Chd4Q6PDQ2 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Chd4Q6PDQ2 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
Chd4Q6PDQ2 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC17.83■□□□□ 0.44
Chd4Q6PDQ2 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.44
Chd4Q6PDQ2 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC17.83■□□□□ 0.44
Chd4Q6PDQ2 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
Chd4Q6PDQ2 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC17.82■□□□□ 0.44
Chd4Q6PDQ2 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Chd4Q6PDQ2 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC17.82■□□□□ 0.44
Chd4Q6PDQ2 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Chd4Q6PDQ2 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC17.82■□□□□ 0.44
Chd4Q6PDQ2 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC17.82■□□□□ 0.44
Chd4Q6PDQ2 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC17.82■□□□□ 0.44
Chd4Q6PDQ2 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Chd4Q6PDQ2 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Chd4Q6PDQ2 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Chd4Q6PDQ2 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Chd4Q6PDQ2 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Chd4Q6PDQ2 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Chd4Q6PDQ2 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Chd4Q6PDQ2 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Chd4Q6PDQ2 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
Chd4Q6PDQ2 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Chd4Q6PDQ2 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Chd4Q6PDQ2 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Chd4Q6PDQ2 AC173210.1-201ENSMUST00000222341 1131 ntBASIC17.82■□□□□ 0.44
Chd4Q6PDQ2 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Chd4Q6PDQ2 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Chd4Q6PDQ2 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Chd4Q6PDQ2 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Chd4Q6PDQ2 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Chd4Q6PDQ2 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC17.81■□□□□ 0.44
Chd4Q6PDQ2 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Chd4Q6PDQ2 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Chd4Q6PDQ2 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Chd4Q6PDQ2 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Chd4Q6PDQ2 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Chd4Q6PDQ2 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC17.81■□□□□ 0.44
Chd4Q6PDQ2 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Chd4Q6PDQ2 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Chd4Q6PDQ2 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Chd4Q6PDQ2 Tmed9-203ENSMUST00000224741 1450 ntBASIC17.81■□□□□ 0.44
Chd4Q6PDQ2 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC17.81■□□□□ 0.44
Chd4Q6PDQ2 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Chd4Q6PDQ2 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Chd4Q6PDQ2 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
Chd4Q6PDQ2 Gm11637-201ENSMUST00000120601 592 ntBASIC17.81■□□□□ 0.44
Chd4Q6PDQ2 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Chd4Q6PDQ2 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC17.81■□□□□ 0.44
Chd4Q6PDQ2 AC134254.1-201ENSMUST00000221362 167 ntBASIC17.81■□□□□ 0.44
Chd4Q6PDQ2 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Chd4Q6PDQ2 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Chd4Q6PDQ2 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Chd4Q6PDQ2 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Chd4Q6PDQ2 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Chd4Q6PDQ2 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC17.81■□□□□ 0.44
Chd4Q6PDQ2 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Chd4Q6PDQ2 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Chd4Q6PDQ2 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Chd4Q6PDQ2 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Chd4Q6PDQ2 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC17.81■□□□□ 0.44
Chd4Q6PDQ2 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC17.81■□□□□ 0.44
Chd4Q6PDQ2 Gm38049-201ENSMUST00000195698 1372 ntBASIC17.8■□□□□ 0.44
Chd4Q6PDQ2 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms