Protein–RNA interactions for Protein: Q6A0D4

Rftn1, Raftlin, mousemouse

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rftn1Q6A0D4 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rftn1Q6A0D4 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rftn1Q6A0D4 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rftn1Q6A0D4 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rftn1Q6A0D4 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rftn1Q6A0D4 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rftn1Q6A0D4 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Rftn1Q6A0D4 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rftn1Q6A0D4 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rftn1Q6A0D4 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rftn1Q6A0D4 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rftn1Q6A0D4 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Rftn1Q6A0D4 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC14.14□□□□□ -0.15
Rftn1Q6A0D4 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC14.14□□□□□ -0.15
Rftn1Q6A0D4 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Rftn1Q6A0D4 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rftn1Q6A0D4 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rftn1Q6A0D4 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rftn1Q6A0D4 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Rftn1Q6A0D4 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rftn1Q6A0D4 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rftn1Q6A0D4 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Rftn1Q6A0D4 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rftn1Q6A0D4 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rftn1Q6A0D4 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rftn1Q6A0D4 Gm5187-201ENSMUST00000117317 991 ntBASIC14.13□□□□□ -0.15
Rftn1Q6A0D4 Gm5940-201ENSMUST00000117582 1068 ntBASIC14.13□□□□□ -0.15
Rftn1Q6A0D4 Gm14730-201ENSMUST00000122378 1045 ntBASIC14.13□□□□□ -0.15
Rftn1Q6A0D4 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC14.13□□□□□ -0.15
Rftn1Q6A0D4 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC14.13□□□□□ -0.15
Rftn1Q6A0D4 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Rftn1Q6A0D4 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Rftn1Q6A0D4 Gm27514-201ENSMUST00000183692 110 ntBASIC14.13□□□□□ -0.15
Rftn1Q6A0D4 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC14.13□□□□□ -0.15
Rftn1Q6A0D4 Gm7498-201ENSMUST00000203282 1084 ntBASIC14.13□□□□□ -0.15
Rftn1Q6A0D4 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC14.13□□□□□ -0.15
Rftn1Q6A0D4 Gm7399-201ENSMUST00000032395 858 ntBASIC14.13□□□□□ -0.15
Rftn1Q6A0D4 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rftn1Q6A0D4 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rftn1Q6A0D4 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rftn1Q6A0D4 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rftn1Q6A0D4 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rftn1Q6A0D4 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC14.13□□□□□ -0.15
Rftn1Q6A0D4 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Rftn1Q6A0D4 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rftn1Q6A0D4 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC14.13□□□□□ -0.15
Rftn1Q6A0D4 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rftn1Q6A0D4 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rftn1Q6A0D4 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Rftn1Q6A0D4 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC14.13□□□□□ -0.15
Rftn1Q6A0D4 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Rftn1Q6A0D4 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rftn1Q6A0D4 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Rftn1Q6A0D4 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rftn1Q6A0D4 Ankra2-208ENSMUST00000226100 1476 ntBASIC14.12□□□□□ -0.15
Rftn1Q6A0D4 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rftn1Q6A0D4 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Rftn1Q6A0D4 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rftn1Q6A0D4 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Rftn1Q6A0D4 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rftn1Q6A0D4 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
Rftn1Q6A0D4 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rftn1Q6A0D4 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rftn1Q6A0D4 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rftn1Q6A0D4 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Rftn1Q6A0D4 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Rftn1Q6A0D4 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Rftn1Q6A0D4 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Rftn1Q6A0D4 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Rftn1Q6A0D4 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rftn1Q6A0D4 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rftn1Q6A0D4 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rftn1Q6A0D4 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rftn1Q6A0D4 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rftn1Q6A0D4 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rftn1Q6A0D4 Gm23931-201ENSMUST00000103842 109 ntBASIC14.12□□□□□ -0.15
Rftn1Q6A0D4 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rftn1Q6A0D4 Mkl2-203ENSMUST00000115809 667 ntTSL 2 BASIC14.12□□□□□ -0.15
Rftn1Q6A0D4 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC14.12□□□□□ -0.15
Rftn1Q6A0D4 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC14.12□□□□□ -0.15
Rftn1Q6A0D4 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC14.12□□□□□ -0.15
Rftn1Q6A0D4 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Rftn1Q6A0D4 Gm37933-201ENSMUST00000193964 981 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Rftn1Q6A0D4 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC14.12□□□□□ -0.15
Rftn1Q6A0D4 Gm18473-201ENSMUST00000220543 868 ntBASIC14.12□□□□□ -0.15
Rftn1Q6A0D4 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC14.12□□□□□ -0.15
Rftn1Q6A0D4 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rftn1Q6A0D4 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rftn1Q6A0D4 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rftn1Q6A0D4 Mir497b-201ENSMUST00000093601 125 ntBASIC14.12□□□□□ -0.15
Rftn1Q6A0D4 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Rftn1Q6A0D4 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC14.12□□□□□ -0.15
Rftn1Q6A0D4 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rftn1Q6A0D4 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
Rftn1Q6A0D4 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rftn1Q6A0D4 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rftn1Q6A0D4 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rftn1Q6A0D4 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rftn1Q6A0D4 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC14.12□□□□□ -0.15
Rftn1Q6A0D4 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 69.6 ms