Protein–RNA interactions for Protein: Q64347

Clcn1, Chloride channel protein 1, mousemouse

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn1Q64347 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Clcn1Q64347 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Clcn1Q64347 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Clcn1Q64347 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC17.58■□□□□ 0.4
Clcn1Q64347 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Clcn1Q64347 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Clcn1Q64347 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Clcn1Q64347 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Clcn1Q64347 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Clcn1Q64347 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC17.58■□□□□ 0.4
Clcn1Q64347 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Clcn1Q64347 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
Clcn1Q64347 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
Clcn1Q64347 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC17.58■□□□□ 0.4
Clcn1Q64347 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Clcn1Q64347 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Clcn1Q64347 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Clcn1Q64347 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Clcn1Q64347 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Clcn1Q64347 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Clcn1Q64347 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Clcn1Q64347 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Clcn1Q64347 AC121805.2-201ENSMUST00000218808 2538 ntBASIC17.58■□□□□ 0.4
Clcn1Q64347 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Clcn1Q64347 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Clcn1Q64347 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Clcn1Q64347 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Clcn1Q64347 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Clcn1Q64347 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Clcn1Q64347 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Clcn1Q64347 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC17.57■□□□□ 0.4
Clcn1Q64347 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Clcn1Q64347 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Clcn1Q64347 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Clcn1Q64347 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Clcn1Q64347 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Clcn1Q64347 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Clcn1Q64347 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Clcn1Q64347 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Clcn1Q64347 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Clcn1Q64347 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Clcn1Q64347 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Clcn1Q64347 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC17.57■□□□□ 0.4
Clcn1Q64347 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC17.57■□□□□ 0.4
Clcn1Q64347 AC161424.1-202ENSMUST00000213570 767 ntTSL 3 BASIC17.57■□□□□ 0.4
Clcn1Q64347 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Clcn1Q64347 Gm10478-201ENSMUST00000084451 396 ntBASIC17.57■□□□□ 0.4
Clcn1Q64347 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Clcn1Q64347 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Clcn1Q64347 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC17.57■□□□□ 0.4
Clcn1Q64347 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Clcn1Q64347 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Clcn1Q64347 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Clcn1Q64347 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
Clcn1Q64347 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Clcn1Q64347 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Clcn1Q64347 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Clcn1Q64347 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Clcn1Q64347 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Clcn1Q64347 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC17.56■□□□□ 0.4
Clcn1Q64347 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Clcn1Q64347 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Clcn1Q64347 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC17.56■□□□□ 0.4
Clcn1Q64347 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC17.56■□□□□ 0.4
Clcn1Q64347 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC17.56■□□□□ 0.4
Clcn1Q64347 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Clcn1Q64347 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC17.56■□□□□ 0.4
Clcn1Q64347 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Clcn1Q64347 Gm23931-201ENSMUST00000103842 109 ntBASIC17.56■□□□□ 0.4
Clcn1Q64347 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Clcn1Q64347 Gm29127-201ENSMUST00000188304 517 ntBASIC17.56■□□□□ 0.4
Clcn1Q64347 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC17.56■□□□□ 0.4
Clcn1Q64347 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC17.56■□□□□ 0.4
Clcn1Q64347 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Clcn1Q64347 Gm10012-201ENSMUST00000078252 192 ntBASIC17.56■□□□□ 0.4
Clcn1Q64347 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Clcn1Q64347 AC159196.2-201ENSMUST00000224082 1622 ntBASIC17.56■□□□□ 0.4
Clcn1Q64347 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Clcn1Q64347 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Clcn1Q64347 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Clcn1Q64347 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Clcn1Q64347 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Clcn1Q64347 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC17.56■□□□□ 0.4
Clcn1Q64347 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Clcn1Q64347 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Clcn1Q64347 Gm37015-201ENSMUST00000192763 1521 ntBASIC17.56■□□□□ 0.4
Clcn1Q64347 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Clcn1Q64347 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Clcn1Q64347 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Clcn1Q64347 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Clcn1Q64347 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Clcn1Q64347 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC17.55■□□□□ 0.4
Clcn1Q64347 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Clcn1Q64347 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Clcn1Q64347 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Clcn1Q64347 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Clcn1Q64347 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Clcn1Q64347 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC17.55■□□□□ 0.4
Clcn1Q64347 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Clcn1Q64347 Nupl1-207ENSMUST00000225311 2475 ntBASIC17.55■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms