Protein–RNA interactions for Protein: Q62205

Scn9a, Sodium channel protein type 9 subunit alpha, mousemouse

Predictions only

Length 1,984 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9aQ62205 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Scn9aQ62205 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Scn9aQ62205 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Scn9aQ62205 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC16.06■□□□□ 0.16
Scn9aQ62205 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Scn9aQ62205 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Scn9aQ62205 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC16.06■□□□□ 0.16
Scn9aQ62205 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Scn9aQ62205 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Scn9aQ62205 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Scn9aQ62205 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC16.06■□□□□ 0.16
Scn9aQ62205 B9d1os-201ENSMUST00000137010 674 ntBASIC16.06■□□□□ 0.16
Scn9aQ62205 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC16.06■□□□□ 0.16
Scn9aQ62205 Psma7-201ENSMUST00000029082 914 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Scn9aQ62205 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Scn9aQ62205 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Scn9aQ62205 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Scn9aQ62205 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Scn9aQ62205 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Scn9aQ62205 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Scn9aQ62205 Gm9333-201ENSMUST00000205452 1323 ntBASIC16.05■□□□□ 0.16
Scn9aQ62205 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Scn9aQ62205 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Scn9aQ62205 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Scn9aQ62205 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Scn9aQ62205 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Scn9aQ62205 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Scn9aQ62205 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC16.05■□□□□ 0.16
Scn9aQ62205 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC16.05■□□□□ 0.16
Scn9aQ62205 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Scn9aQ62205 Gm18244-201ENSMUST00000219747 1566 ntBASIC16.05■□□□□ 0.16
Scn9aQ62205 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Scn9aQ62205 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC16.05■□□□□ 0.16
Scn9aQ62205 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC16.05■□□□□ 0.16
Scn9aQ62205 AC134254.1-201ENSMUST00000221362 167 ntBASIC16.05■□□□□ 0.16
Scn9aQ62205 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Scn9aQ62205 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Scn9aQ62205 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Scn9aQ62205 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC16.05■□□□□ 0.16
Scn9aQ62205 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
Scn9aQ62205 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Scn9aQ62205 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Scn9aQ62205 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Scn9aQ62205 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Scn9aQ62205 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Scn9aQ62205 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Scn9aQ62205 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC16.04■□□□□ 0.16
Scn9aQ62205 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Scn9aQ62205 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC16.04■□□□□ 0.16
Scn9aQ62205 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC16.04■□□□□ 0.16
Scn9aQ62205 Gm22334-201ENSMUST00000158070 133 ntBASIC16.04■□□□□ 0.16
Scn9aQ62205 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC16.04■□□□□ 0.16
Scn9aQ62205 Gm37986-201ENSMUST00000193285 383 ntBASIC16.04■□□□□ 0.16
Scn9aQ62205 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC16.04■□□□□ 0.16
Scn9aQ62205 Gm43947-201ENSMUST00000203019 959 ntBASIC16.04■□□□□ 0.16
Scn9aQ62205 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC16.04■□□□□ 0.16
Scn9aQ62205 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Scn9aQ62205 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Scn9aQ62205 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Scn9aQ62205 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Scn9aQ62205 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Scn9aQ62205 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Scn9aQ62205 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Scn9aQ62205 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Scn9aQ62205 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
Scn9aQ62205 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Scn9aQ62205 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Scn9aQ62205 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Scn9aQ62205 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Scn9aQ62205 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Scn9aQ62205 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Scn9aQ62205 Gm11637-201ENSMUST00000120601 592 ntBASIC16.04■□□□□ 0.16
Scn9aQ62205 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Scn9aQ62205 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Scn9aQ62205 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC16.04■□□□□ 0.16
Scn9aQ62205 Morn2-202ENSMUST00000227729 656 ntBASIC16.04■□□□□ 0.16
Scn9aQ62205 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Scn9aQ62205 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Scn9aQ62205 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Scn9aQ62205 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC16.03■□□□□ 0.16
Scn9aQ62205 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Scn9aQ62205 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Scn9aQ62205 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Scn9aQ62205 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Scn9aQ62205 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Scn9aQ62205 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Scn9aQ62205 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC16.03■□□□□ 0.16
Scn9aQ62205 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Scn9aQ62205 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Scn9aQ62205 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
Scn9aQ62205 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Scn9aQ62205 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Scn9aQ62205 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Scn9aQ62205 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Scn9aQ62205 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Scn9aQ62205 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Scn9aQ62205 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Scn9aQ62205 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Scn9aQ62205 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Scn9aQ62205 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms