Protein–RNA interactions for Protein: Q62066

Phox2a, Paired mesoderm homeobox protein 2A, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Phox2aQ62066 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Phox2aQ62066 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Phox2aQ62066 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Phox2aQ62066 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC11.49□□□□□ -0.57
Phox2aQ62066 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Phox2aQ62066 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Phox2aQ62066 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC11.49□□□□□ -0.57
Phox2aQ62066 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC11.49□□□□□ -0.57
Phox2aQ62066 Gm34391-201ENSMUST00000203706 907 ntBASIC11.49□□□□□ -0.57
Phox2aQ62066 AC160338.1-201ENSMUST00000214232 705 ntBASIC11.49□□□□□ -0.57
Phox2aQ62066 AC155729.1-201ENSMUST00000227758 544 ntBASIC11.49□□□□□ -0.57
Phox2aQ62066 Birc2-201ENSMUST00000054878 378 ntBASIC11.49□□□□□ -0.57
Phox2aQ62066 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Phox2aQ62066 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Phox2aQ62066 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Phox2aQ62066 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Phox2aQ62066 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Phox2aQ62066 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Phox2aQ62066 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC11.49□□□□□ -0.57
Phox2aQ62066 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Phox2aQ62066 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Phox2aQ62066 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Phox2aQ62066 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Phox2aQ62066 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Phox2aQ62066 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Phox2aQ62066 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Phox2aQ62066 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Phox2aQ62066 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Phox2aQ62066 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Phox2aQ62066 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Phox2aQ62066 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Phox2aQ62066 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Phox2aQ62066 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Phox2aQ62066 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Phox2aQ62066 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Phox2aQ62066 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Phox2aQ62066 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC11.48□□□□□ -0.57
Phox2aQ62066 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Phox2aQ62066 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Phox2aQ62066 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Phox2aQ62066 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC11.48□□□□□ -0.57
Phox2aQ62066 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC11.48□□□□□ -0.57
Phox2aQ62066 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Phox2aQ62066 AC158538.2-201ENSMUST00000225455 906 ntBASIC11.48□□□□□ -0.57
Phox2aQ62066 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Phox2aQ62066 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Phox2aQ62066 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Phox2aQ62066 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Phox2aQ62066 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC11.48□□□□□ -0.57
Phox2aQ62066 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Phox2aQ62066 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Phox2aQ62066 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC11.48□□□□□ -0.57
Phox2aQ62066 Gm7899-201ENSMUST00000192935 1897 ntBASIC11.48□□□□□ -0.57
Phox2aQ62066 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Phox2aQ62066 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Phox2aQ62066 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Phox2aQ62066 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Phox2aQ62066 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Phox2aQ62066 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Phox2aQ62066 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC11.48□□□□□ -0.57
Phox2aQ62066 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Phox2aQ62066 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Phox2aQ62066 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Phox2aQ62066 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Phox2aQ62066 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Phox2aQ62066 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Phox2aQ62066 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Phox2aQ62066 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Phox2aQ62066 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Phox2aQ62066 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Phox2aQ62066 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Phox2aQ62066 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Phox2aQ62066 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Phox2aQ62066 Gm18263-201ENSMUST00000220846 1928 ntBASIC11.47□□□□□ -0.57
Phox2aQ62066 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Phox2aQ62066 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Phox2aQ62066 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Phox2aQ62066 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Phox2aQ62066 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Phox2aQ62066 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Phox2aQ62066 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Phox2aQ62066 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC11.47□□□□□ -0.57
Phox2aQ62066 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC11.47□□□□□ -0.57
Phox2aQ62066 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC11.47□□□□□ -0.57
Phox2aQ62066 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC11.47□□□□□ -0.57
Phox2aQ62066 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Phox2aQ62066 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Phox2aQ62066 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Phox2aQ62066 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC11.47□□□□□ -0.57
Phox2aQ62066 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Phox2aQ62066 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Phox2aQ62066 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC11.47□□□□□ -0.57
Phox2aQ62066 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC11.47□□□□□ -0.57
Phox2aQ62066 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Phox2aQ62066 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC11.46□□□□□ -0.57
Phox2aQ62066 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.57
Phox2aQ62066 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Phox2aQ62066 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Phox2aQ62066 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Phox2aQ62066 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms