Protein–RNA interactions for Protein: Q62059

Vcan, Versican core protein, mousemouse

Predictions only

Length 3,357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcanQ62059 Gm2824-203ENSMUST00000226189 1228 ntBASIC12.77□□□□□ -0.37
VcanQ62059 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC12.77□□□□□ -0.37
VcanQ62059 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.37
VcanQ62059 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
VcanQ62059 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
VcanQ62059 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
VcanQ62059 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
VcanQ62059 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
VcanQ62059 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
VcanQ62059 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
VcanQ62059 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
VcanQ62059 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
VcanQ62059 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC12.77□□□□□ -0.37
VcanQ62059 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
VcanQ62059 Timm9-201ENSMUST00000021486 794 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
VcanQ62059 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
VcanQ62059 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
VcanQ62059 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
VcanQ62059 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
VcanQ62059 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
VcanQ62059 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
VcanQ62059 Gm6771-201ENSMUST00000182716 1001 ntBASIC12.76□□□□□ -0.37
VcanQ62059 Timm10b-210ENSMUST00000209588 373 ntTSL 3 BASIC12.76□□□□□ -0.37
VcanQ62059 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
VcanQ62059 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
VcanQ62059 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
VcanQ62059 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
VcanQ62059 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
VcanQ62059 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
VcanQ62059 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
VcanQ62059 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC12.76□□□□□ -0.37
VcanQ62059 Prdx1-202ENSMUST00000106470 877 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
VcanQ62059 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
VcanQ62059 Gm15957-201ENSMUST00000118893 974 ntBASIC12.76□□□□□ -0.37
VcanQ62059 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
VcanQ62059 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC12.76□□□□□ -0.37
VcanQ62059 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
VcanQ62059 Gm5070-201ENSMUST00000177599 862 ntBASIC12.76□□□□□ -0.37
VcanQ62059 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
VcanQ62059 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
VcanQ62059 Plp2-201ENSMUST00000033486 1157 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
VcanQ62059 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
VcanQ62059 Lce1e-201ENSMUST00000090867 711 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
VcanQ62059 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
VcanQ62059 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
VcanQ62059 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
VcanQ62059 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
VcanQ62059 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
VcanQ62059 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
VcanQ62059 AC139054.1-201ENSMUST00000226898 1598 ntBASIC12.76□□□□□ -0.37
VcanQ62059 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
VcanQ62059 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC12.76□□□□□ -0.37
VcanQ62059 Gm14199-201ENSMUST00000130021 495 ntTSL 2 BASIC12.75□□□□□ -0.37
VcanQ62059 Gm9726-201ENSMUST00000180321 678 ntBASIC12.75□□□□□ -0.37
VcanQ62059 Gm30285-201ENSMUST00000214614 422 ntBASIC12.75□□□□□ -0.37
VcanQ62059 AC154849.4-201ENSMUST00000224868 365 ntBASIC12.75□□□□□ -0.37
VcanQ62059 Gm10146-201ENSMUST00000072739 309 ntBASIC12.75□□□□□ -0.37
VcanQ62059 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
VcanQ62059 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
VcanQ62059 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
VcanQ62059 Gm5846-201ENSMUST00000193146 1414 ntBASIC12.75□□□□□ -0.37
VcanQ62059 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
VcanQ62059 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
VcanQ62059 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
VcanQ62059 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
VcanQ62059 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
VcanQ62059 Mocs2-205ENSMUST00000165022 962 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
VcanQ62059 Plac9a-202ENSMUST00000183431 536 ntTSL 3 BASIC12.75□□□□□ -0.37
VcanQ62059 Plac9b-204ENSMUST00000184675 536 ntTSL 3 BASIC12.75□□□□□ -0.37
VcanQ62059 2610027F03Rik-202ENSMUST00000186982 603 ntTSL 5 BASIC12.75□□□□□ -0.37
VcanQ62059 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC12.75□□□□□ -0.37
VcanQ62059 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
VcanQ62059 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
VcanQ62059 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
VcanQ62059 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
VcanQ62059 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
VcanQ62059 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
VcanQ62059 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
VcanQ62059 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC12.75□□□□□ -0.37
VcanQ62059 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
VcanQ62059 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
VcanQ62059 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC12.75□□□□□ -0.37
VcanQ62059 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC12.75□□□□□ -0.37
VcanQ62059 Gm9211-201ENSMUST00000182882 975 ntBASIC12.75□□□□□ -0.37
VcanQ62059 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC12.75□□□□□ -0.37
VcanQ62059 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC12.75□□□□□ -0.37
VcanQ62059 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
VcanQ62059 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC12.75□□□□□ -0.37
VcanQ62059 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC12.75□□□□□ -0.37
VcanQ62059 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
VcanQ62059 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
VcanQ62059 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
VcanQ62059 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
VcanQ62059 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC12.74□□□□□ -0.37
VcanQ62059 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
VcanQ62059 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
VcanQ62059 Ttc4-202ENSMUST00000106772 935 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
VcanQ62059 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC12.74□□□□□ -0.37
VcanQ62059 Gm16397-201ENSMUST00000122201 494 ntBASIC12.74□□□□□ -0.37
VcanQ62059 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 62.7 ms