Protein–RNA interactions for Protein: Q61982

Notch3, Neurogenic locus notch homolog protein 3, mousemouse

Predictions only

Length 2,318 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Notch3Q61982 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Notch3Q61982 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
Notch3Q61982 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Notch3Q61982 Gm10584-201ENSMUST00000207036 2628 ntBASIC10.72□□□□□ -0.69
Notch3Q61982 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Notch3Q61982 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Notch3Q61982 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Notch3Q61982 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Notch3Q61982 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Notch3Q61982 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Notch3Q61982 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Notch3Q61982 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
Notch3Q61982 Gm15678-201ENSMUST00000117573 960 ntBASIC10.72□□□□□ -0.69
Notch3Q61982 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC10.72□□□□□ -0.69
Notch3Q61982 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC10.72□□□□□ -0.69
Notch3Q61982 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Notch3Q61982 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Notch3Q61982 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Notch3Q61982 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Notch3Q61982 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC10.72□□□□□ -0.69
Notch3Q61982 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Notch3Q61982 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Notch3Q61982 Ttc14-201ENSMUST00000099153 9661 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Notch3Q61982 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Notch3Q61982 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Notch3Q61982 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Notch3Q61982 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC10.72□□□□□ -0.69
Notch3Q61982 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Notch3Q61982 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Notch3Q61982 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Notch3Q61982 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Notch3Q61982 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Notch3Q61982 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Notch3Q61982 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Notch3Q61982 Gm5354-201ENSMUST00000182417 973 ntBASIC10.72□□□□□ -0.69
Notch3Q61982 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC10.72□□□□□ -0.69
Notch3Q61982 Gm37917-201ENSMUST00000194711 392 ntBASIC10.72□□□□□ -0.69
Notch3Q61982 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC10.72□□□□□ -0.69
Notch3Q61982 AC162801.1-201ENSMUST00000220612 198 ntBASIC10.72□□□□□ -0.69
Notch3Q61982 AC156016.3-201ENSMUST00000228623 344 ntBASIC10.72□□□□□ -0.69
Notch3Q61982 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Notch3Q61982 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
Notch3Q61982 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC10.72□□□□□ -0.69
Notch3Q61982 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Notch3Q61982 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Notch3Q61982 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Notch3Q61982 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Notch3Q61982 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Notch3Q61982 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Notch3Q61982 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Notch3Q61982 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Notch3Q61982 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Notch3Q61982 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Notch3Q61982 Gm8242-201ENSMUST00000193029 1420 ntBASIC10.71□□□□□ -0.69
Notch3Q61982 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Notch3Q61982 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC10.71□□□□□ -0.69
Notch3Q61982 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
Notch3Q61982 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Notch3Q61982 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC10.71□□□□□ -0.69
Notch3Q61982 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Notch3Q61982 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Notch3Q61982 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Notch3Q61982 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC10.71□□□□□ -0.69
Notch3Q61982 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Notch3Q61982 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Notch3Q61982 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.7
Notch3Q61982 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
Notch3Q61982 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.7
Notch3Q61982 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.7
Notch3Q61982 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC10.71□□□□□ -0.7
Notch3Q61982 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Notch3Q61982 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Notch3Q61982 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Notch3Q61982 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Notch3Q61982 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Notch3Q61982 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC10.71□□□□□ -0.7
Notch3Q61982 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC10.71□□□□□ -0.7
Notch3Q61982 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.7
Notch3Q61982 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC10.71□□□□□ -0.7
Notch3Q61982 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Notch3Q61982 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Notch3Q61982 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
Notch3Q61982 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Notch3Q61982 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC10.7□□□□□ -0.7
Notch3Q61982 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Notch3Q61982 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Notch3Q61982 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Notch3Q61982 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Notch3Q61982 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC10.7□□□□□ -0.7
Notch3Q61982 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Notch3Q61982 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Notch3Q61982 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Notch3Q61982 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Notch3Q61982 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Notch3Q61982 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Notch3Q61982 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Notch3Q61982 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
Notch3Q61982 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC10.7□□□□□ -0.7
Notch3Q61982 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Notch3Q61982 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC10.7□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 54.4 ms