Protein–RNA interactions for Protein: Q61321

Six4, Homeobox protein SIX4, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six4Q61321 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Six4Q61321 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC14.03□□□□□ -0.16
Six4Q61321 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC14.03□□□□□ -0.16
Six4Q61321 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Six4Q61321 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Six4Q61321 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Six4Q61321 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Six4Q61321 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Six4Q61321 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Six4Q61321 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Six4Q61321 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Six4Q61321 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Six4Q61321 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Six4Q61321 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Six4Q61321 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Six4Q61321 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Six4Q61321 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
Six4Q61321 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Six4Q61321 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC14.02□□□□□ -0.17
Six4Q61321 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Six4Q61321 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Six4Q61321 Gm45195-201ENSMUST00000205597 1008 ntBASIC14.02□□□□□ -0.17
Six4Q61321 Gm44855-201ENSMUST00000205725 362 ntBASIC14.02□□□□□ -0.17
Six4Q61321 Gm6218-201ENSMUST00000219812 628 ntBASIC14.02□□□□□ -0.17
Six4Q61321 Gm9797-201ENSMUST00000052902 613 ntBASIC14.02□□□□□ -0.17
Six4Q61321 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.17
Six4Q61321 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Six4Q61321 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Six4Q61321 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Six4Q61321 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Six4Q61321 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Six4Q61321 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Six4Q61321 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Six4Q61321 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC14.02□□□□□ -0.17
Six4Q61321 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.17
Six4Q61321 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Six4Q61321 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Six4Q61321 Gm42872-201ENSMUST00000200026 1967 ntBASIC14.02□□□□□ -0.17
Six4Q61321 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Six4Q61321 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Six4Q61321 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Six4Q61321 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC14.01□□□□□ -0.17
Six4Q61321 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Six4Q61321 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Six4Q61321 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Six4Q61321 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Six4Q61321 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Six4Q61321 AC166491.1-201ENSMUST00000227053 2308 ntBASIC14.01□□□□□ -0.17
Six4Q61321 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Six4Q61321 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Six4Q61321 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC14.01□□□□□ -0.17
Six4Q61321 Gm6473-201ENSMUST00000188572 1210 ntBASIC14.01□□□□□ -0.17
Six4Q61321 Gm42612-201ENSMUST00000197986 623 ntBASIC14.01□□□□□ -0.17
Six4Q61321 Gm43170-201ENSMUST00000199827 612 ntBASIC14.01□□□□□ -0.17
Six4Q61321 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Six4Q61321 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Six4Q61321 Gm5425-201ENSMUST00000214125 459 ntBASIC14.01□□□□□ -0.17
Six4Q61321 AC165157.4-201ENSMUST00000220587 139 ntBASIC14.01□□□□□ -0.17
Six4Q61321 AC166997.1-201ENSMUST00000225122 572 ntBASIC14.01□□□□□ -0.17
Six4Q61321 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Six4Q61321 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Six4Q61321 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Six4Q61321 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Six4Q61321 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Six4Q61321 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Six4Q61321 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Six4Q61321 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Six4Q61321 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Six4Q61321 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Six4Q61321 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Six4Q61321 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Six4Q61321 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Six4Q61321 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Six4Q61321 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC14□□□□□ -0.17
Six4Q61321 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC14□□□□□ -0.17
Six4Q61321 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Six4Q61321 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Six4Q61321 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC14□□□□□ -0.17
Six4Q61321 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Six4Q61321 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC14□□□□□ -0.17
Six4Q61321 Gm3365-201ENSMUST00000216296 1480 ntBASIC14□□□□□ -0.17
Six4Q61321 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Six4Q61321 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC14□□□□□ -0.17
Six4Q61321 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Six4Q61321 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC14□□□□□ -0.17
Six4Q61321 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Six4Q61321 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Six4Q61321 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC14□□□□□ -0.17
Six4Q61321 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Six4Q61321 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC14□□□□□ -0.17
Six4Q61321 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Six4Q61321 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC14□□□□□ -0.17
Six4Q61321 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC14□□□□□ -0.17
Six4Q61321 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC14□□□□□ -0.17
Six4Q61321 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Six4Q61321 Gm7730-201ENSMUST00000212486 454 ntBASIC14□□□□□ -0.17
Six4Q61321 Gm17795-201ENSMUST00000214505 757 ntBASIC14□□□□□ -0.17
Six4Q61321 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Six4Q61321 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Six4Q61321 Gm19863-201ENSMUST00000192480 2218 ntBASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms