Protein–RNA interactions for Protein: Q61245

Col11a1, Collagen alpha-1(XI) chain, mousemouse

Predictions only

Length 1,804 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a1Q61245 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC15.25■□□□□ 0.03
Col11a1Q61245 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Col11a1Q61245 Cd27-203ENSMUST00000112282 588 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Col11a1Q61245 Gm8738-201ENSMUST00000172606 329 ntBASIC15.25■□□□□ 0.03
Col11a1Q61245 Gm37986-201ENSMUST00000193285 383 ntBASIC15.25■□□□□ 0.03
Col11a1Q61245 Gm8959-201ENSMUST00000213150 571 ntBASIC15.25■□□□□ 0.03
Col11a1Q61245 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Col11a1Q61245 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Col11a1Q61245 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC15.25■□□□□ 0.03
Col11a1Q61245 Gm19221-201ENSMUST00000221827 1477 ntBASIC15.25■□□□□ 0.03
Col11a1Q61245 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Col11a1Q61245 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Col11a1Q61245 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC15.25■□□□□ 0.03
Col11a1Q61245 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Col11a1Q61245 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Col11a1Q61245 Gm37728-201ENSMUST00000195025 2292 ntBASIC15.25■□□□□ 0.03
Col11a1Q61245 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Col11a1Q61245 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Col11a1Q61245 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC15.24■□□□□ 0.03
Col11a1Q61245 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Col11a1Q61245 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Col11a1Q61245 Gm14017-201ENSMUST00000121934 386 ntBASIC15.24■□□□□ 0.03
Col11a1Q61245 Gm25043-201ENSMUST00000158604 212 ntBASIC15.24■□□□□ 0.03
Col11a1Q61245 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Col11a1Q61245 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Col11a1Q61245 AA914427-201ENSMUST00000193194 1166 ntBASIC15.24■□□□□ 0.03
Col11a1Q61245 Gm32025-201ENSMUST00000217960 307 ntBASIC15.24■□□□□ 0.03
Col11a1Q61245 AC069562.3-201ENSMUST00000225387 587 ntBASIC15.24■□□□□ 0.03
Col11a1Q61245 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Col11a1Q61245 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Col11a1Q61245 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Col11a1Q61245 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Col11a1Q61245 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Col11a1Q61245 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Col11a1Q61245 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Col11a1Q61245 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Col11a1Q61245 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Col11a1Q61245 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Col11a1Q61245 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Col11a1Q61245 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Col11a1Q61245 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Col11a1Q61245 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Col11a1Q61245 Gm23200-201ENSMUST00000104379 132 ntBASIC15.24■□□□□ 0.03
Col11a1Q61245 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC15.24■□□□□ 0.03
Col11a1Q61245 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
Col11a1Q61245 Gm13570-201ENSMUST00000140763 309 ntBASIC15.24■□□□□ 0.03
Col11a1Q61245 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC15.24■□□□□ 0.03
Col11a1Q61245 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Col11a1Q61245 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Col11a1Q61245 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Col11a1Q61245 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Col11a1Q61245 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Col11a1Q61245 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Col11a1Q61245 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Col11a1Q61245 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Col11a1Q61245 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Col11a1Q61245 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Col11a1Q61245 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Col11a1Q61245 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Col11a1Q61245 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Col11a1Q61245 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Col11a1Q61245 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Col11a1Q61245 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Col11a1Q61245 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Col11a1Q61245 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Col11a1Q61245 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Col11a1Q61245 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Col11a1Q61245 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC15.23■□□□□ 0.03
Col11a1Q61245 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Col11a1Q61245 Gm14726-201ENSMUST00000120623 896 ntBASIC15.23■□□□□ 0.03
Col11a1Q61245 Gm11978-201ENSMUST00000122315 466 ntBASIC15.23■□□□□ 0.03
Col11a1Q61245 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Col11a1Q61245 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Col11a1Q61245 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Col11a1Q61245 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Col11a1Q61245 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Col11a1Q61245 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Col11a1Q61245 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Col11a1Q61245 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC15.23■□□□□ 0.03
Col11a1Q61245 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Col11a1Q61245 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Col11a1Q61245 Gm12500-202ENSMUST00000186471 2428 ntBASIC15.23■□□□□ 0.03
Col11a1Q61245 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Col11a1Q61245 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Col11a1Q61245 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Col11a1Q61245 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Col11a1Q61245 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Col11a1Q61245 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Col11a1Q61245 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Col11a1Q61245 Gm15276-201ENSMUST00000145953 498 ntBASIC15.22■□□□□ 0.03
Col11a1Q61245 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC15.22■□□□□ 0.03
Col11a1Q61245 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Col11a1Q61245 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Col11a1Q61245 Gm31256-201ENSMUST00000194705 506 ntBASIC15.22■□□□□ 0.03
Col11a1Q61245 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Col11a1Q61245 Gm19208-201ENSMUST00000213861 912 ntBASIC15.22■□□□□ 0.03
Col11a1Q61245 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Col11a1Q61245 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC15.22■□□□□ 0.03
Col11a1Q61245 n-R5s77-201ENSMUST00000083757 119 ntBASIC15.22■□□□□ 0.03
Col11a1Q61245 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 43.5 ms