Protein–RNA interactions for Protein: Q60769

Tnfaip3, Tumor necrosis factor alpha-induced protein 3, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfaip3Q60769 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC13.1□□□□□ -0.31
Tnfaip3Q60769 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC13.1□□□□□ -0.31
Tnfaip3Q60769 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC13.1□□□□□ -0.31
Tnfaip3Q60769 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Tnfaip3Q60769 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Tnfaip3Q60769 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Tnfaip3Q60769 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Tnfaip3Q60769 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Tnfaip3Q60769 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Tnfaip3Q60769 AC114543.1-201ENSMUST00000226451 1558 ntBASIC13.1□□□□□ -0.31
Tnfaip3Q60769 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC13.1□□□□□ -0.31
Tnfaip3Q60769 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC13.1□□□□□ -0.31
Tnfaip3Q60769 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Tnfaip3Q60769 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Tnfaip3Q60769 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC13.1□□□□□ -0.31
Tnfaip3Q60769 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Tnfaip3Q60769 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Tnfaip3Q60769 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Tnfaip3Q60769 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Tnfaip3Q60769 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Tnfaip3Q60769 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC13.1□□□□□ -0.31
Tnfaip3Q60769 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Tnfaip3Q60769 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Tnfaip3Q60769 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Tnfaip3Q60769 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Tnfaip3Q60769 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Tnfaip3Q60769 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Tnfaip3Q60769 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Tnfaip3Q60769 AC115735.4-201ENSMUST00000227460 1944 ntBASIC13.09□□□□□ -0.31
Tnfaip3Q60769 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Tnfaip3Q60769 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Tnfaip3Q60769 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Tnfaip3Q60769 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC13.09□□□□□ -0.31
Tnfaip3Q60769 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Tnfaip3Q60769 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Tnfaip3Q60769 Gm37411-201ENSMUST00000194180 2282 ntBASIC13.09□□□□□ -0.31
Tnfaip3Q60769 Gm12859-201ENSMUST00000117834 427 ntBASIC13.09□□□□□ -0.31
Tnfaip3Q60769 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC13.09□□□□□ -0.31
Tnfaip3Q60769 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Tnfaip3Q60769 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Tnfaip3Q60769 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
Tnfaip3Q60769 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC13.09□□□□□ -0.31
Tnfaip3Q60769 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Tnfaip3Q60769 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Tnfaip3Q60769 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
Tnfaip3Q60769 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC13.09□□□□□ -0.31
Tnfaip3Q60769 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC13.09□□□□□ -0.31
Tnfaip3Q60769 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC13.09□□□□□ -0.31
Tnfaip3Q60769 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Tnfaip3Q60769 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Tnfaip3Q60769 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Tnfaip3Q60769 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Tnfaip3Q60769 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Tnfaip3Q60769 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Tnfaip3Q60769 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Tnfaip3Q60769 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Tnfaip3Q60769 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Tnfaip3Q60769 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Tnfaip3Q60769 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Tnfaip3Q60769 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Tnfaip3Q60769 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Tnfaip3Q60769 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Tnfaip3Q60769 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Tnfaip3Q60769 Ldb3-207ENSMUST00000227819 1499 ntBASIC13.09□□□□□ -0.31
Tnfaip3Q60769 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Tnfaip3Q60769 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Tnfaip3Q60769 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Tnfaip3Q60769 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC13.09□□□□□ -0.31
Tnfaip3Q60769 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Tnfaip3Q60769 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Tnfaip3Q60769 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC13.08□□□□□ -0.31
Tnfaip3Q60769 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Tnfaip3Q60769 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Tnfaip3Q60769 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC13.08□□□□□ -0.32
Tnfaip3Q60769 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Tnfaip3Q60769 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Tnfaip3Q60769 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Tnfaip3Q60769 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Tnfaip3Q60769 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Tnfaip3Q60769 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Tnfaip3Q60769 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC13.08□□□□□ -0.32
Tnfaip3Q60769 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC13.08□□□□□ -0.32
Tnfaip3Q60769 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Tnfaip3Q60769 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Tnfaip3Q60769 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC13.08□□□□□ -0.32
Tnfaip3Q60769 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Tnfaip3Q60769 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Tnfaip3Q60769 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC13.08□□□□□ -0.32
Tnfaip3Q60769 Gm31326-201ENSMUST00000191856 1048 ntBASIC13.08□□□□□ -0.32
Tnfaip3Q60769 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Tnfaip3Q60769 Gtpbp10-211ENSMUST00000198799 648 ntBASIC13.08□□□□□ -0.32
Tnfaip3Q60769 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Tnfaip3Q60769 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC13.08□□□□□ -0.32
Tnfaip3Q60769 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC13.08□□□□□ -0.32
Tnfaip3Q60769 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Tnfaip3Q60769 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Tnfaip3Q60769 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Tnfaip3Q60769 Gm14452-201ENSMUST00000118680 1632 ntBASIC13.08□□□□□ -0.32
Tnfaip3Q60769 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Tnfaip3Q60769 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms