Protein–RNA interactions for Protein: Q60641

Nr1h4, Bile acid receptor, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h4Q60641 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Nr1h4Q60641 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nr1h4Q60641 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Nr1h4Q60641 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nr1h4Q60641 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nr1h4Q60641 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nr1h4Q60641 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nr1h4Q60641 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Nr1h4Q60641 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nr1h4Q60641 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nr1h4Q60641 Gm10729-202ENSMUST00000193403 1375 ntBASIC13.25□□□□□ -0.29
Nr1h4Q60641 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC13.25□□□□□ -0.29
Nr1h4Q60641 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC13.25□□□□□ -0.29
Nr1h4Q60641 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC13.25□□□□□ -0.29
Nr1h4Q60641 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC13.25□□□□□ -0.29
Nr1h4Q60641 Gm7229-201ENSMUST00000214719 1007 ntBASIC13.25□□□□□ -0.29
Nr1h4Q60641 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Nr1h4Q60641 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nr1h4Q60641 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nr1h4Q60641 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nr1h4Q60641 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nr1h4Q60641 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nr1h4Q60641 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC13.25□□□□□ -0.29
Nr1h4Q60641 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nr1h4Q60641 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nr1h4Q60641 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nr1h4Q60641 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nr1h4Q60641 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Nr1h4Q60641 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Nr1h4Q60641 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nr1h4Q60641 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nr1h4Q60641 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Nr1h4Q60641 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nr1h4Q60641 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nr1h4Q60641 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nr1h4Q60641 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Nr1h4Q60641 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nr1h4Q60641 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nr1h4Q60641 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nr1h4Q60641 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nr1h4Q60641 Gm12892-201ENSMUST00000117367 1146 ntBASIC13.24□□□□□ -0.29
Nr1h4Q60641 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC13.24□□□□□ -0.29
Nr1h4Q60641 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nr1h4Q60641 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Nr1h4Q60641 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Nr1h4Q60641 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC13.24□□□□□ -0.29
Nr1h4Q60641 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Nr1h4Q60641 AC154595.3-201ENSMUST00000224579 384 ntBASIC13.24□□□□□ -0.29
Nr1h4Q60641 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nr1h4Q60641 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nr1h4Q60641 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Nr1h4Q60641 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Nr1h4Q60641 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nr1h4Q60641 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nr1h4Q60641 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Nr1h4Q60641 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nr1h4Q60641 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Nr1h4Q60641 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nr1h4Q60641 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nr1h4Q60641 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Nr1h4Q60641 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Nr1h4Q60641 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nr1h4Q60641 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Nr1h4Q60641 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Nr1h4Q60641 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nr1h4Q60641 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Nr1h4Q60641 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nr1h4Q60641 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Nr1h4Q60641 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nr1h4Q60641 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Nr1h4Q60641 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nr1h4Q60641 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nr1h4Q60641 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nr1h4Q60641 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Nr1h4Q60641 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC13.23□□□□□ -0.29
Nr1h4Q60641 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Nr1h4Q60641 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Nr1h4Q60641 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Nr1h4Q60641 Gm44945-201ENSMUST00000206764 1187 ntBASIC13.23□□□□□ -0.29
Nr1h4Q60641 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nr1h4Q60641 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nr1h4Q60641 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nr1h4Q60641 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Nr1h4Q60641 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nr1h4Q60641 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nr1h4Q60641 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Nr1h4Q60641 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Nr1h4Q60641 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Nr1h4Q60641 Gm45053-201ENSMUST00000206112 2499 ntBASIC13.23□□□□□ -0.29
Nr1h4Q60641 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nr1h4Q60641 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nr1h4Q60641 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Nr1h4Q60641 Gm37437-201ENSMUST00000194451 1937 ntBASIC13.23□□□□□ -0.29
Nr1h4Q60641 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Nr1h4Q60641 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nr1h4Q60641 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC13.23□□□□□ -0.29
Nr1h4Q60641 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Nr1h4Q60641 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nr1h4Q60641 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nr1h4Q60641 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC13.23□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms