Protein–RNA interactions for Protein: Q5SX79

Shroom1, Protein Shroom1, mousemouse

Predictions only

Length 823 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom1Q5SX79 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC14.8□□□□□ -0.04
Shroom1Q5SX79 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC14.8□□□□□ -0.04
Shroom1Q5SX79 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Shroom1Q5SX79 AC102291.3-201ENSMUST00000226566 405 ntBASIC14.8□□□□□ -0.04
Shroom1Q5SX79 AC155729.1-201ENSMUST00000227758 544 ntBASIC14.8□□□□□ -0.04
Shroom1Q5SX79 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Shroom1Q5SX79 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Shroom1Q5SX79 Gm25857-201ENSMUST00000082788 129 ntBASIC14.8□□□□□ -0.04
Shroom1Q5SX79 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Shroom1Q5SX79 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Shroom1Q5SX79 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Shroom1Q5SX79 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Shroom1Q5SX79 Gm15222-202ENSMUST00000228667 1726 ntBASIC14.8□□□□□ -0.04
Shroom1Q5SX79 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Shroom1Q5SX79 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Shroom1Q5SX79 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Shroom1Q5SX79 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC14.8□□□□□ -0.04
Shroom1Q5SX79 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Shroom1Q5SX79 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Shroom1Q5SX79 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Shroom1Q5SX79 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Shroom1Q5SX79 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Shroom1Q5SX79 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Shroom1Q5SX79 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Shroom1Q5SX79 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC14.79□□□□□ -0.04
Shroom1Q5SX79 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Shroom1Q5SX79 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC14.79□□□□□ -0.04
Shroom1Q5SX79 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Shroom1Q5SX79 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
Shroom1Q5SX79 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Shroom1Q5SX79 Gm17795-201ENSMUST00000214505 757 ntBASIC14.79□□□□□ -0.04
Shroom1Q5SX79 AC162801.1-201ENSMUST00000220612 198 ntBASIC14.79□□□□□ -0.04
Shroom1Q5SX79 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Shroom1Q5SX79 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Shroom1Q5SX79 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Shroom1Q5SX79 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Shroom1Q5SX79 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Shroom1Q5SX79 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Shroom1Q5SX79 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Shroom1Q5SX79 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Shroom1Q5SX79 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Shroom1Q5SX79 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Shroom1Q5SX79 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Shroom1Q5SX79 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Shroom1Q5SX79 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC14.78□□□□□ -0.04
Shroom1Q5SX79 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Shroom1Q5SX79 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Shroom1Q5SX79 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Shroom1Q5SX79 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC14.78□□□□□ -0.04
Shroom1Q5SX79 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Shroom1Q5SX79 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Shroom1Q5SX79 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Shroom1Q5SX79 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Shroom1Q5SX79 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Shroom1Q5SX79 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Shroom1Q5SX79 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC14.78□□□□□ -0.04
Shroom1Q5SX79 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Shroom1Q5SX79 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Shroom1Q5SX79 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Shroom1Q5SX79 Gm15240-201ENSMUST00000118156 720 ntBASIC14.78□□□□□ -0.04
Shroom1Q5SX79 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC14.78□□□□□ -0.04
Shroom1Q5SX79 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Shroom1Q5SX79 Gm8602-201ENSMUST00000184045 607 ntBASIC14.78□□□□□ -0.04
Shroom1Q5SX79 CT030657.3-201ENSMUST00000222707 1200 ntBASIC14.78□□□□□ -0.04
Shroom1Q5SX79 AC159006.1-201ENSMUST00000226396 258 ntBASIC14.78□□□□□ -0.04
Shroom1Q5SX79 AC155252.1-201ENSMUST00000226462 1208 ntBASIC14.78□□□□□ -0.04
Shroom1Q5SX79 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC14.78□□□□□ -0.04
Shroom1Q5SX79 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Shroom1Q5SX79 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Shroom1Q5SX79 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Shroom1Q5SX79 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Shroom1Q5SX79 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Shroom1Q5SX79 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Shroom1Q5SX79 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Shroom1Q5SX79 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC14.78□□□□□ -0.04
Shroom1Q5SX79 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Shroom1Q5SX79 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Shroom1Q5SX79 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Shroom1Q5SX79 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
Shroom1Q5SX79 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Shroom1Q5SX79 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Shroom1Q5SX79 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Shroom1Q5SX79 AC154527.2-201ENSMUST00000225256 1466 ntBASIC14.77□□□□□ -0.04
Shroom1Q5SX79 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC14.77□□□□□ -0.04
Shroom1Q5SX79 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Shroom1Q5SX79 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
Shroom1Q5SX79 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Shroom1Q5SX79 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
Shroom1Q5SX79 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC14.77□□□□□ -0.05
Shroom1Q5SX79 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Shroom1Q5SX79 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Shroom1Q5SX79 Gm28911-201ENSMUST00000188837 117 ntBASIC14.77□□□□□ -0.05
Shroom1Q5SX79 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC14.77□□□□□ -0.05
Shroom1Q5SX79 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC14.77□□□□□ -0.05
Shroom1Q5SX79 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Shroom1Q5SX79 AC139350.3-201ENSMUST00000226151 420 ntBASIC14.77□□□□□ -0.05
Shroom1Q5SX79 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Shroom1Q5SX79 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Shroom1Q5SX79 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
Shroom1Q5SX79 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms