Protein–RNA interactions for Protein: Q3V0C5

Usp48, Ubiquitin carboxyl-terminal hydrolase 48, mousemouse

Predictions only

Length 1,052 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp48Q3V0C5 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Usp48Q3V0C5 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Usp48Q3V0C5 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Usp48Q3V0C5 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Usp48Q3V0C5 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Usp48Q3V0C5 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
Usp48Q3V0C5 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Usp48Q3V0C5 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Usp48Q3V0C5 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Usp48Q3V0C5 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Usp48Q3V0C5 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Usp48Q3V0C5 Gm43205-201ENSMUST00000198622 1968 ntBASIC17.21■□□□□ 0.35
Usp48Q3V0C5 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Usp48Q3V0C5 Gm27731-201ENSMUST00000185192 107 ntBASIC17.21■□□□□ 0.35
Usp48Q3V0C5 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC17.21■□□□□ 0.35
Usp48Q3V0C5 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC17.21■□□□□ 0.35
Usp48Q3V0C5 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Usp48Q3V0C5 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Usp48Q3V0C5 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Usp48Q3V0C5 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Usp48Q3V0C5 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Usp48Q3V0C5 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Usp48Q3V0C5 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC17.21■□□□□ 0.35
Usp48Q3V0C5 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.34
Usp48Q3V0C5 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.34
Usp48Q3V0C5 Gm5912-201ENSMUST00000122282 1438 ntBASIC17.21■□□□□ 0.34
Usp48Q3V0C5 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Usp48Q3V0C5 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
Usp48Q3V0C5 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Usp48Q3V0C5 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC17.2■□□□□ 0.34
Usp48Q3V0C5 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Usp48Q3V0C5 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Usp48Q3V0C5 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Usp48Q3V0C5 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Usp48Q3V0C5 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Usp48Q3V0C5 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Usp48Q3V0C5 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Usp48Q3V0C5 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Usp48Q3V0C5 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC17.2■□□□□ 0.34
Usp48Q3V0C5 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Usp48Q3V0C5 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Usp48Q3V0C5 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Usp48Q3V0C5 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC17.2■□□□□ 0.34
Usp48Q3V0C5 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Usp48Q3V0C5 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Usp48Q3V0C5 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Usp48Q3V0C5 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC17.2■□□□□ 0.34
Usp48Q3V0C5 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Usp48Q3V0C5 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Usp48Q3V0C5 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Usp48Q3V0C5 Gm45667-201ENSMUST00000210380 1316 ntBASIC17.2■□□□□ 0.34
Usp48Q3V0C5 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC17.2■□□□□ 0.34
Usp48Q3V0C5 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC17.2■□□□□ 0.34
Usp48Q3V0C5 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Usp48Q3V0C5 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Usp48Q3V0C5 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Usp48Q3V0C5 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC17.19■□□□□ 0.34
Usp48Q3V0C5 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC17.19■□□□□ 0.34
Usp48Q3V0C5 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC17.19■□□□□ 0.34
Usp48Q3V0C5 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Usp48Q3V0C5 Gm12329-201ENSMUST00000120829 1007 ntBASIC17.19■□□□□ 0.34
Usp48Q3V0C5 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC17.19■□□□□ 0.34
Usp48Q3V0C5 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC17.19■□□□□ 0.34
Usp48Q3V0C5 Ighv1-25-201ENSMUST00000195638 345 ntBASIC17.19■□□□□ 0.34
Usp48Q3V0C5 Gm9182-201ENSMUST00000217829 639 ntBASIC17.19■□□□□ 0.34
Usp48Q3V0C5 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Usp48Q3V0C5 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Usp48Q3V0C5 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Usp48Q3V0C5 BC001981-202ENSMUST00000191393 1545 ntBASIC17.19■□□□□ 0.34
Usp48Q3V0C5 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC17.19■□□□□ 0.34
Usp48Q3V0C5 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Usp48Q3V0C5 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Usp48Q3V0C5 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Usp48Q3V0C5 Gm44645-201ENSMUST00000205492 1653 ntBASIC17.19■□□□□ 0.34
Usp48Q3V0C5 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC17.19■□□□□ 0.34
Usp48Q3V0C5 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Usp48Q3V0C5 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Usp48Q3V0C5 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Usp48Q3V0C5 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Usp48Q3V0C5 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
Usp48Q3V0C5 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC17.18■□□□□ 0.34
Usp48Q3V0C5 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Usp48Q3V0C5 Zscan30-202ENSMUST00000224144 1458 ntBASIC17.18■□□□□ 0.34
Usp48Q3V0C5 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC17.18■□□□□ 0.34
Usp48Q3V0C5 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Usp48Q3V0C5 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Usp48Q3V0C5 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Usp48Q3V0C5 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Usp48Q3V0C5 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Usp48Q3V0C5 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
Usp48Q3V0C5 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Usp48Q3V0C5 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Usp48Q3V0C5 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Usp48Q3V0C5 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Usp48Q3V0C5 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Usp48Q3V0C5 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Usp48Q3V0C5 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Usp48Q3V0C5 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC17.18■□□□□ 0.34
Usp48Q3V0C5 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC17.18■□□□□ 0.34
Usp48Q3V0C5 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC17.18■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms