Protein–RNA interactions for Protein: Q3ULL6

Upf3b, UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3bQ3ULL6 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Upf3bQ3ULL6 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC14.9□□□□□ -0.02
Upf3bQ3ULL6 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Upf3bQ3ULL6 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Upf3bQ3ULL6 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Upf3bQ3ULL6 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Upf3bQ3ULL6 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Upf3bQ3ULL6 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Upf3bQ3ULL6 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Upf3bQ3ULL6 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC14.89□□□□□ -0.03
Upf3bQ3ULL6 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC14.89□□□□□ -0.03
Upf3bQ3ULL6 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Upf3bQ3ULL6 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Upf3bQ3ULL6 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Upf3bQ3ULL6 Gm14057-201ENSMUST00000120631 482 ntBASIC14.89□□□□□ -0.03
Upf3bQ3ULL6 Gm15487-201ENSMUST00000122373 465 ntBASIC14.89□□□□□ -0.03
Upf3bQ3ULL6 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Upf3bQ3ULL6 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC14.89□□□□□ -0.03
Upf3bQ3ULL6 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Upf3bQ3ULL6 Gm29741-201ENSMUST00000192667 421 ntBASIC14.89□□□□□ -0.03
Upf3bQ3ULL6 Gm10766-202ENSMUST00000194123 606 ntBASIC14.89□□□□□ -0.03
Upf3bQ3ULL6 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC14.89□□□□□ -0.03
Upf3bQ3ULL6 AC158982.1-201ENSMUST00000228377 901 ntBASIC14.89□□□□□ -0.03
Upf3bQ3ULL6 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Upf3bQ3ULL6 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Upf3bQ3ULL6 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Upf3bQ3ULL6 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Upf3bQ3ULL6 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Upf3bQ3ULL6 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Upf3bQ3ULL6 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Upf3bQ3ULL6 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Upf3bQ3ULL6 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Upf3bQ3ULL6 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Upf3bQ3ULL6 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Upf3bQ3ULL6 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC14.89□□□□□ -0.03
Upf3bQ3ULL6 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Upf3bQ3ULL6 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Upf3bQ3ULL6 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Upf3bQ3ULL6 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Upf3bQ3ULL6 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Upf3bQ3ULL6 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Upf3bQ3ULL6 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC14.88□□□□□ -0.03
Upf3bQ3ULL6 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Upf3bQ3ULL6 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC14.88□□□□□ -0.03
Upf3bQ3ULL6 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Upf3bQ3ULL6 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC14.88□□□□□ -0.03
Upf3bQ3ULL6 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Upf3bQ3ULL6 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Upf3bQ3ULL6 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Upf3bQ3ULL6 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Upf3bQ3ULL6 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Upf3bQ3ULL6 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Upf3bQ3ULL6 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Upf3bQ3ULL6 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Upf3bQ3ULL6 Gm27838-201ENSMUST00000184829 128 ntBASIC14.88□□□□□ -0.03
Upf3bQ3ULL6 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
Upf3bQ3ULL6 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC14.88□□□□□ -0.03
Upf3bQ3ULL6 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Upf3bQ3ULL6 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Upf3bQ3ULL6 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC14.88□□□□□ -0.03
Upf3bQ3ULL6 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Upf3bQ3ULL6 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Upf3bQ3ULL6 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Upf3bQ3ULL6 Gm42471-201ENSMUST00000201457 1865 ntBASIC14.88□□□□□ -0.03
Upf3bQ3ULL6 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Upf3bQ3ULL6 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Upf3bQ3ULL6 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Upf3bQ3ULL6 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC14.88□□□□□ -0.03
Upf3bQ3ULL6 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Upf3bQ3ULL6 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Upf3bQ3ULL6 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Upf3bQ3ULL6 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Upf3bQ3ULL6 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Upf3bQ3ULL6 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Upf3bQ3ULL6 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Upf3bQ3ULL6 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Upf3bQ3ULL6 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Upf3bQ3ULL6 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Upf3bQ3ULL6 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Upf3bQ3ULL6 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Upf3bQ3ULL6 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Upf3bQ3ULL6 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC14.87□□□□□ -0.03
Upf3bQ3ULL6 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Upf3bQ3ULL6 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Upf3bQ3ULL6 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Upf3bQ3ULL6 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Upf3bQ3ULL6 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Upf3bQ3ULL6 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Upf3bQ3ULL6 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
Upf3bQ3ULL6 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Upf3bQ3ULL6 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Upf3bQ3ULL6 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC14.87□□□□□ -0.03
Upf3bQ3ULL6 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Upf3bQ3ULL6 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC14.87□□□□□ -0.03
Upf3bQ3ULL6 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
Upf3bQ3ULL6 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Upf3bQ3ULL6 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC14.87□□□□□ -0.03
Upf3bQ3ULL6 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC14.87□□□□□ -0.03
Upf3bQ3ULL6 Gm3809-201ENSMUST00000180973 1006 ntBASIC14.87□□□□□ -0.03
Upf3bQ3ULL6 Ighv1-51-201ENSMUST00000192903 354 ntBASIC14.87□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 45.3 ms