Protein–RNA interactions for Protein: Q3UAW9

Brf2, Transcription factor IIIB 50 kDa subunit, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf2Q3UAW9 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC13.13□□□□□ -0.31
Brf2Q3UAW9 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Brf2Q3UAW9 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Brf2Q3UAW9 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Brf2Q3UAW9 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Brf2Q3UAW9 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC13.12□□□□□ -0.31
Brf2Q3UAW9 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Brf2Q3UAW9 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Brf2Q3UAW9 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Brf2Q3UAW9 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Brf2Q3UAW9 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Brf2Q3UAW9 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Brf2Q3UAW9 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Brf2Q3UAW9 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Brf2Q3UAW9 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Brf2Q3UAW9 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Brf2Q3UAW9 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Brf2Q3UAW9 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Brf2Q3UAW9 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Brf2Q3UAW9 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Brf2Q3UAW9 Gm15693-201ENSMUST00000120470 637 ntBASIC13.12□□□□□ -0.31
Brf2Q3UAW9 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Brf2Q3UAW9 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC13.12□□□□□ -0.31
Brf2Q3UAW9 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Brf2Q3UAW9 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Brf2Q3UAW9 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC13.12□□□□□ -0.31
Brf2Q3UAW9 Gm3809-201ENSMUST00000180973 1006 ntBASIC13.12□□□□□ -0.31
Brf2Q3UAW9 Gm37714-201ENSMUST00000194742 342 ntBASIC13.12□□□□□ -0.31
Brf2Q3UAW9 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC13.12□□□□□ -0.31
Brf2Q3UAW9 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Brf2Q3UAW9 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Brf2Q3UAW9 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC13.12□□□□□ -0.31
Brf2Q3UAW9 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Brf2Q3UAW9 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC13.12□□□□□ -0.31
Brf2Q3UAW9 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Brf2Q3UAW9 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Brf2Q3UAW9 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Brf2Q3UAW9 Gm45667-201ENSMUST00000210380 1316 ntBASIC13.12□□□□□ -0.31
Brf2Q3UAW9 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Brf2Q3UAW9 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Brf2Q3UAW9 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC13.11□□□□□ -0.31
Brf2Q3UAW9 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Brf2Q3UAW9 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Brf2Q3UAW9 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Brf2Q3UAW9 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Brf2Q3UAW9 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Brf2Q3UAW9 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Brf2Q3UAW9 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Brf2Q3UAW9 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Brf2Q3UAW9 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Brf2Q3UAW9 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Brf2Q3UAW9 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Brf2Q3UAW9 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Brf2Q3UAW9 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Brf2Q3UAW9 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Brf2Q3UAW9 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Brf2Q3UAW9 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Brf2Q3UAW9 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Brf2Q3UAW9 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Brf2Q3UAW9 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
Brf2Q3UAW9 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC13.11□□□□□ -0.31
Brf2Q3UAW9 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC13.11□□□□□ -0.31
Brf2Q3UAW9 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Brf2Q3UAW9 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC13.11□□□□□ -0.31
Brf2Q3UAW9 Gm28630-201ENSMUST00000187806 498 ntBASIC13.11□□□□□ -0.31
Brf2Q3UAW9 Gm43575-201ENSMUST00000196420 516 ntBASIC13.11□□□□□ -0.31
Brf2Q3UAW9 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Brf2Q3UAW9 Gm6916-202ENSMUST00000205523 195 ntBASIC13.11□□□□□ -0.31
Brf2Q3UAW9 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Brf2Q3UAW9 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Brf2Q3UAW9 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Brf2Q3UAW9 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC13.11□□□□□ -0.31
Brf2Q3UAW9 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Brf2Q3UAW9 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Brf2Q3UAW9 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Brf2Q3UAW9 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Brf2Q3UAW9 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Brf2Q3UAW9 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Brf2Q3UAW9 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Brf2Q3UAW9 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Brf2Q3UAW9 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Brf2Q3UAW9 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
Brf2Q3UAW9 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Brf2Q3UAW9 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Brf2Q3UAW9 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
Brf2Q3UAW9 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Brf2Q3UAW9 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Brf2Q3UAW9 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC13.1□□□□□ -0.31
Brf2Q3UAW9 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC13.1□□□□□ -0.31
Brf2Q3UAW9 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Brf2Q3UAW9 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Brf2Q3UAW9 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Brf2Q3UAW9 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Brf2Q3UAW9 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Brf2Q3UAW9 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Brf2Q3UAW9 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Brf2Q3UAW9 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Brf2Q3UAW9 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC13.1□□□□□ -0.31
Brf2Q3UAW9 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Brf2Q3UAW9 Gm23935-201ENSMUST00000102303 57 ntBASIC13.1□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 46.8 ms