Protein–RNA interactions for Protein: Q3U962

Col5a2, Collagen alpha-2(V) chain, mousemouse

Predictions only

Length 1,497 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a2Q3U962 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Col5a2Q3U962 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Col5a2Q3U962 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Col5a2Q3U962 Gm11637-201ENSMUST00000120601 592 ntBASIC16.28■□□□□ 0.2
Col5a2Q3U962 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Col5a2Q3U962 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
Col5a2Q3U962 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC16.28■□□□□ 0.2
Col5a2Q3U962 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Col5a2Q3U962 Gm4819-201ENSMUST00000182170 1009 ntBASIC16.28■□□□□ 0.2
Col5a2Q3U962 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC16.28■□□□□ 0.2
Col5a2Q3U962 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC16.28■□□□□ 0.2
Col5a2Q3U962 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC16.28■□□□□ 0.2
Col5a2Q3U962 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC16.28■□□□□ 0.2
Col5a2Q3U962 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC16.28■□□□□ 0.2
Col5a2Q3U962 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Col5a2Q3U962 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC16.28■□□□□ 0.2
Col5a2Q3U962 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Col5a2Q3U962 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Col5a2Q3U962 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Col5a2Q3U962 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Col5a2Q3U962 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Col5a2Q3U962 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Col5a2Q3U962 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Col5a2Q3U962 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Col5a2Q3U962 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Col5a2Q3U962 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Col5a2Q3U962 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC16.27■□□□□ 0.2
Col5a2Q3U962 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Col5a2Q3U962 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Col5a2Q3U962 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC16.27■□□□□ 0.2
Col5a2Q3U962 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Col5a2Q3U962 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Col5a2Q3U962 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
Col5a2Q3U962 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
Col5a2Q3U962 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Col5a2Q3U962 Gm8584-201ENSMUST00000171982 758 ntBASIC16.27■□□□□ 0.19
Col5a2Q3U962 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Col5a2Q3U962 Gm37489-201ENSMUST00000191883 159 ntBASIC16.27■□□□□ 0.19
Col5a2Q3U962 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Col5a2Q3U962 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Col5a2Q3U962 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Col5a2Q3U962 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC16.27■□□□□ 0.19
Col5a2Q3U962 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Col5a2Q3U962 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Col5a2Q3U962 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Col5a2Q3U962 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC16.26■□□□□ 0.19
Col5a2Q3U962 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Col5a2Q3U962 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC16.26■□□□□ 0.19
Col5a2Q3U962 Fbxl12-205ENSMUST00000140702 1555 ntBASIC16.26■□□□□ 0.19
Col5a2Q3U962 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Col5a2Q3U962 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC16.26■□□□□ 0.19
Col5a2Q3U962 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC16.26■□□□□ 0.19
Col5a2Q3U962 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Col5a2Q3U962 Gm9768-201ENSMUST00000206007 2861 ntBASIC16.26■□□□□ 0.19
Col5a2Q3U962 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Col5a2Q3U962 Sun1-203ENSMUST00000100517 1522 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Col5a2Q3U962 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Col5a2Q3U962 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Col5a2Q3U962 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Col5a2Q3U962 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Col5a2Q3U962 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Col5a2Q3U962 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Col5a2Q3U962 Gm24830-201ENSMUST00000102024 166 ntBASIC16.26■□□□□ 0.19
Col5a2Q3U962 Gm24990-201ENSMUST00000157406 323 ntBASIC16.26■□□□□ 0.19
Col5a2Q3U962 Gm25890-201ENSMUST00000177643 165 ntBASIC16.26■□□□□ 0.19
Col5a2Q3U962 Rnu1b2-201ENSMUST00000178073 165 ntBASIC16.26■□□□□ 0.19
Col5a2Q3U962 Rnu1b1-201ENSMUST00000178250 165 ntBASIC16.26■□□□□ 0.19
Col5a2Q3U962 Gm22614-201ENSMUST00000178300 165 ntBASIC16.26■□□□□ 0.19
Col5a2Q3U962 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC16.26■□□□□ 0.19
Col5a2Q3U962 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC16.26■□□□□ 0.19
Col5a2Q3U962 Rpl24-201ENSMUST00000023269 677 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Col5a2Q3U962 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Col5a2Q3U962 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Col5a2Q3U962 Gm22042-201ENSMUST00000082989 165 ntBASIC16.26■□□□□ 0.19
Col5a2Q3U962 Gm26232-201ENSMUST00000083360 166 ntBASIC16.26■□□□□ 0.19
Col5a2Q3U962 Gm24136-201ENSMUST00000083374 165 ntBASIC16.26■□□□□ 0.19
Col5a2Q3U962 Rnu1b6-201ENSMUST00000083839 166 ntBASIC16.26■□□□□ 0.19
Col5a2Q3U962 Gm26110-201ENSMUST00000083971 165 ntBASIC16.26■□□□□ 0.19
Col5a2Q3U962 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Col5a2Q3U962 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Col5a2Q3U962 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC16.26■□□□□ 0.19
Col5a2Q3U962 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Col5a2Q3U962 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Col5a2Q3U962 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Col5a2Q3U962 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC16.26■□□□□ 0.19
Col5a2Q3U962 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Col5a2Q3U962 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Col5a2Q3U962 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Col5a2Q3U962 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Col5a2Q3U962 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Col5a2Q3U962 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Col5a2Q3U962 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Col5a2Q3U962 Gm44981-201ENSMUST00000205549 1943 ntBASIC16.25■□□□□ 0.19
Col5a2Q3U962 Gm11439-201ENSMUST00000118598 409 ntBASIC16.25■□□□□ 0.19
Col5a2Q3U962 Gm22902-201ENSMUST00000158488 302 ntBASIC16.25■□□□□ 0.19
Col5a2Q3U962 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Col5a2Q3U962 Tmem40-205ENSMUST00000166254 811 ntAPPRIS P3 TSL 5 BASIC16.25■□□□□ 0.19
Col5a2Q3U962 Mir5120-201ENSMUST00000175020 78 ntBASIC16.25■□□□□ 0.19
Col5a2Q3U962 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC16.25■□□□□ 0.19
Col5a2Q3U962 AC131997.1-201ENSMUST00000228611 1229 ntBASIC16.25■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms