Protein–RNA interactions for Protein: Q3TR08

Fndc4, Fibronectin type III domain-containing protein 4, mousemouse

Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fndc4Q3TR08 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Fndc4Q3TR08 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Fndc4Q3TR08 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Fndc4Q3TR08 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Fndc4Q3TR08 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Fndc4Q3TR08 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Fndc4Q3TR08 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Fndc4Q3TR08 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Fndc4Q3TR08 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Fndc4Q3TR08 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Fndc4Q3TR08 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Fndc4Q3TR08 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Fndc4Q3TR08 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Fndc4Q3TR08 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Fndc4Q3TR08 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC11.88□□□□□ -0.51
Fndc4Q3TR08 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Fndc4Q3TR08 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Fndc4Q3TR08 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Fndc4Q3TR08 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Fndc4Q3TR08 Gm4913-201ENSMUST00000117075 1290 ntBASIC11.88□□□□□ -0.51
Fndc4Q3TR08 Gm6226-201ENSMUST00000117765 1146 ntBASIC11.88□□□□□ -0.51
Fndc4Q3TR08 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC11.88□□□□□ -0.51
Fndc4Q3TR08 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Fndc4Q3TR08 Ndufaf2-202ENSMUST00000223734 556 ntBASIC11.88□□□□□ -0.51
Fndc4Q3TR08 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Fndc4Q3TR08 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Fndc4Q3TR08 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Fndc4Q3TR08 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Fndc4Q3TR08 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Fndc4Q3TR08 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Fndc4Q3TR08 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Fndc4Q3TR08 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Fndc4Q3TR08 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Fndc4Q3TR08 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Fndc4Q3TR08 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Fndc4Q3TR08 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Fndc4Q3TR08 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Fndc4Q3TR08 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Fndc4Q3TR08 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Fndc4Q3TR08 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Fndc4Q3TR08 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC11.88□□□□□ -0.51
Fndc4Q3TR08 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Fndc4Q3TR08 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Fndc4Q3TR08 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC11.88□□□□□ -0.51
Fndc4Q3TR08 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC11.87□□□□□ -0.51
Fndc4Q3TR08 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Fndc4Q3TR08 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Fndc4Q3TR08 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC11.87□□□□□ -0.51
Fndc4Q3TR08 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Fndc4Q3TR08 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Fndc4Q3TR08 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC11.87□□□□□ -0.51
Fndc4Q3TR08 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Fndc4Q3TR08 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Fndc4Q3TR08 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC11.87□□□□□ -0.51
Fndc4Q3TR08 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Fndc4Q3TR08 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Fndc4Q3TR08 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Fndc4Q3TR08 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Fndc4Q3TR08 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Fndc4Q3TR08 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Fndc4Q3TR08 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Fndc4Q3TR08 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC11.87□□□□□ -0.51
Fndc4Q3TR08 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC11.87□□□□□ -0.51
Fndc4Q3TR08 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Fndc4Q3TR08 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Fndc4Q3TR08 Gm45612-201ENSMUST00000211320 160 ntBASIC11.87□□□□□ -0.51
Fndc4Q3TR08 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Fndc4Q3TR08 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC11.87□□□□□ -0.51
Fndc4Q3TR08 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Fndc4Q3TR08 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Fndc4Q3TR08 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Fndc4Q3TR08 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC11.87□□□□□ -0.51
Fndc4Q3TR08 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Fndc4Q3TR08 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Fndc4Q3TR08 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Fndc4Q3TR08 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Fndc4Q3TR08 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Fndc4Q3TR08 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Fndc4Q3TR08 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Fndc4Q3TR08 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Fndc4Q3TR08 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Fndc4Q3TR08 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Fndc4Q3TR08 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Fndc4Q3TR08 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Fndc4Q3TR08 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Fndc4Q3TR08 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Fndc4Q3TR08 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Fndc4Q3TR08 Gm37861-201ENSMUST00000193534 2869 ntBASIC11.86□□□□□ -0.51
Fndc4Q3TR08 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Fndc4Q3TR08 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Fndc4Q3TR08 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Fndc4Q3TR08 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC11.86□□□□□ -0.51
Fndc4Q3TR08 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Fndc4Q3TR08 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC11.86□□□□□ -0.51
Fndc4Q3TR08 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC11.86□□□□□ -0.51
Fndc4Q3TR08 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC11.86□□□□□ -0.51
Fndc4Q3TR08 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC11.86□□□□□ -0.51
Fndc4Q3TR08 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC11.86□□□□□ -0.51
Fndc4Q3TR08 Gm15483-201ENSMUST00000120338 456 ntBASIC11.86□□□□□ -0.51
Fndc4Q3TR08 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC11.86□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms