Protein–RNA interactions for Protein: Q07563

Col17a1, Collagen alpha-1(XVII) chain, mousemouse

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1Q07563 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
Col17a1Q07563 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
Col17a1Q07563 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
Col17a1Q07563 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Col17a1Q07563 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Col17a1Q07563 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC20.87■□□□□ 0.93
Col17a1Q07563 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Col17a1Q07563 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Col17a1Q07563 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC20.87■□□□□ 0.93
Col17a1Q07563 Zfp809-201ENSMUST00000072465 1425 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Col17a1Q07563 Ighv10-3-201ENSMUST00000103495 377 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
Col17a1Q07563 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Col17a1Q07563 Gm11892-201ENSMUST00000117711 1202 ntBASIC20.87■□□□□ 0.93
Col17a1Q07563 Gm11980-201ENSMUST00000121445 986 ntBASIC20.87■□□□□ 0.93
Col17a1Q07563 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Col17a1Q07563 1810021B22Rik-201ENSMUST00000150364 652 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Col17a1Q07563 Gm17812-201ENSMUST00000204935 318 ntBASIC20.87■□□□□ 0.93
Col17a1Q07563 CT025602.2-201ENSMUST00000226553 772 ntBASIC20.87■□□□□ 0.93
Col17a1Q07563 Prrxl1-205ENSMUST00000228878 723 ntBASIC20.87■□□□□ 0.93
Col17a1Q07563 Phxr2-201ENSMUST00000060761 1159 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
Col17a1Q07563 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Col17a1Q07563 Gm10076-201ENSMUST00000073238 384 ntBASIC20.87■□□□□ 0.93
Col17a1Q07563 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
Col17a1Q07563 4930523C07Rik-202ENSMUST00000097513 300 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
Col17a1Q07563 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Col17a1Q07563 Sertm1-202ENSMUST00000162201 2899 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Col17a1Q07563 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Col17a1Q07563 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC20.86■□□□□ 0.93
Col17a1Q07563 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC20.86■□□□□ 0.93
Col17a1Q07563 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC20.86■□□□□ 0.93
Col17a1Q07563 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Col17a1Q07563 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Col17a1Q07563 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Col17a1Q07563 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Col17a1Q07563 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Col17a1Q07563 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC20.86■□□□□ 0.93
Col17a1Q07563 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Col17a1Q07563 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Col17a1Q07563 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Col17a1Q07563 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Col17a1Q07563 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC20.86■□□□□ 0.93
Col17a1Q07563 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Col17a1Q07563 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC20.86■□□□□ 0.93
Col17a1Q07563 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Col17a1Q07563 Agtpbp1-216ENSMUST00000168821 721 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Col17a1Q07563 Pdzd9-203ENSMUST00000208635 1238 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Col17a1Q07563 Prss51-201ENSMUST00000063785 961 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Col17a1Q07563 AC169511.2-201ENSMUST00000226674 2063 ntBASIC20.86■□□□□ 0.93
Col17a1Q07563 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Col17a1Q07563 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Col17a1Q07563 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Col17a1Q07563 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC20.85■□□□□ 0.93
Col17a1Q07563 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Col17a1Q07563 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
Col17a1Q07563 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Col17a1Q07563 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Col17a1Q07563 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Col17a1Q07563 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Col17a1Q07563 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Col17a1Q07563 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Col17a1Q07563 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC20.85■□□□□ 0.93
Col17a1Q07563 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Col17a1Q07563 Slc35b3-202ENSMUST00000167513 1778 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
Col17a1Q07563 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC20.85■□□□□ 0.93
Col17a1Q07563 Mir680-2-201ENSMUST00000102163 110 ntBASIC20.85■□□□□ 0.93
Col17a1Q07563 Gm23251-201ENSMUST00000103773 110 ntBASIC20.85■□□□□ 0.93
Col17a1Q07563 4930502E09Rik-201ENSMUST00000126016 755 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Col17a1Q07563 Gm15881-201ENSMUST00000148792 942 ntBASIC20.85■□□□□ 0.93
Col17a1Q07563 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Col17a1Q07563 Gm40709-203ENSMUST00000219695 973 ntTSL 5 BASIC20.85■□□□□ 0.93
Col17a1Q07563 Emp3-201ENSMUST00000038876 736 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Col17a1Q07563 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Col17a1Q07563 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Col17a1Q07563 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Col17a1Q07563 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Col17a1Q07563 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Col17a1Q07563 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Col17a1Q07563 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Col17a1Q07563 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Col17a1Q07563 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
Col17a1Q07563 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Col17a1Q07563 Gm11941-201ENSMUST00000119904 610 ntBASIC20.84■□□□□ 0.93
Col17a1Q07563 Rdh9-203ENSMUST00000136223 1276 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Col17a1Q07563 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC20.84■□□□□ 0.93
Col17a1Q07563 Creb1-209ENSMUST00000190348 1260 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Col17a1Q07563 Gm43692-201ENSMUST00000198236 1062 ntBASIC20.84■□□□□ 0.93
Col17a1Q07563 Acy1-209ENSMUST00000215395 1051 ntTSL 5 BASIC20.84■□□□□ 0.93
Col17a1Q07563 Acy1-211ENSMUST00000216400 1030 ntTSL 5 BASIC20.84■□□□□ 0.93
Col17a1Q07563 Gm4797-201ENSMUST00000219075 1283 ntBASIC20.84■□□□□ 0.93
Col17a1Q07563 CT030704.2-201ENSMUST00000228887 494 ntBASIC20.84■□□□□ 0.93
Col17a1Q07563 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Col17a1Q07563 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
Col17a1Q07563 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
Col17a1Q07563 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Col17a1Q07563 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Col17a1Q07563 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
Col17a1Q07563 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC20.83■□□□□ 0.93
Col17a1Q07563 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
Col17a1Q07563 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Col17a1Q07563 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms